Enable CCD update from installed package #680
padix-keytest_and_deploy.yml
on: pull_request
Build CCD and wheel for reusing it in several CI jobs
11m 42s
Generate wheels matrix
8s
Check code style
8s
Build source distribution
9s
Test interfaces to databases and applications
2m 19s
Test interface to Muscle 5
59s
Matrix: Build & Test
Upload documentation to GitHub Releases and documentation website
0s
Upload package to GitHub Releases & PyPI
0s
Annotations
34 errors and 15 warnings
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Build & Test (cp311-manylinux_x86_64, ubuntu-latest)
Unable to download artifact(s): Artifact not found for name: ccd
Please ensure that your artifact is not expired and the artifact was uploaded using a compatible version of toolkit/upload-artifact.
For more information, visit the GitHub Artifacts FAQ: https://github.com/actions/toolkit/blob/main/packages/artifact/docs/faq.md
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Upload CCD to GitHub Releases
Unable to download artifact(s): Artifact not found for name: ccd
Please ensure that your artifact is not expired and the artifact was uploaded using a compatible version of toolkit/upload-artifact.
For more information, visit the GitHub Artifacts FAQ: https://github.com/actions/toolkit/blob/main/packages/artifact/docs/faq.md
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Build & Test (cp313-macosx_arm64, macos-latest)
The job was canceled because "cp311-manylinux_x86_64_ub" failed.
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Build & Test (cp313-macosx_x86_64, macos-latest)
The job was canceled because "cp311-manylinux_x86_64_ub" failed.
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Build & Test (cp312-macosx_x86_64, macos-latest)
The job was canceled because "cp311-manylinux_x86_64_ub" failed.
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Build & Test (cp313-manylinux_x86_64, ubuntu-latest)
The job was canceled because "cp311-manylinux_x86_64_ub" failed.
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Build & Test (cp313-manylinux_x86_64, ubuntu-latest)
Unable to download artifact(s): Artifact not found for name: ccd
Please ensure that your artifact is not expired and the artifact was uploaded using a compatible version of toolkit/upload-artifact.
For more information, visit the GitHub Artifacts FAQ: https://github.com/actions/toolkit/blob/main/packages/artifact/docs/faq.md
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Build & Test (cp310-manylinux_x86_64, ubuntu-latest)
The job was canceled because "cp311-manylinux_x86_64_ub" failed.
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Build & Test (cp310-manylinux_x86_64, ubuntu-latest)
Unable to download artifact(s): Artifact not found for name: ccd
Please ensure that your artifact is not expired and the artifact was uploaded using a compatible version of toolkit/upload-artifact.
For more information, visit the GitHub Artifacts FAQ: https://github.com/actions/toolkit/blob/main/packages/artifact/docs/faq.md
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Build & Test (cp312-manylinux_x86_64, ubuntu-latest)
The job was canceled because "cp311-manylinux_x86_64_ub" failed.
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Build & Test (cp312-manylinux_x86_64, ubuntu-latest)
Unable to download artifact(s): Artifact not found for name: ccd
Please ensure that your artifact is not expired and the artifact was uploaded using a compatible version of toolkit/upload-artifact.
For more information, visit the GitHub Artifacts FAQ: https://github.com/actions/toolkit/blob/main/packages/artifact/docs/faq.md
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Build & Test (cp311-macosx_arm64, macos-latest)
The job was canceled because "cp311-manylinux_x86_64_ub" failed.
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Build & Test (cp311-macosx_arm64, macos-latest)
The operation was canceled.
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Build & Test (cp312-win_amd64, windows-latest)
The job was canceled because "cp311-manylinux_x86_64_ub" failed.
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Build & Test (cp312-win_amd64, windows-latest)
The operation was canceled.
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Build source distribution
Unable to download artifact(s): Artifact not found for name: ccd
Please ensure that your artifact is not expired and the artifact was uploaded using a compatible version of toolkit/upload-artifact.
For more information, visit the GitHub Artifacts FAQ: https://github.com/actions/toolkit/blob/main/packages/artifact/docs/faq.md
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Build & Test (cp311-macosx_x86_64, macos-latest)
The job was canceled because "cp311-manylinux_x86_64_ub" failed.
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Build & Test (cp311-macosx_x86_64, macos-latest)
The operation was canceled.
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Build & Test (cp310-macosx_arm64, macos-latest)
The job was canceled because "cp311-manylinux_x86_64_ub" failed.
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Build & Test (cp310-macosx_arm64, macos-latest)
The operation was canceled.
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Build & Test (cp313-win_amd64, windows-latest)
The job was canceled because "cp311-manylinux_x86_64_ub" failed.
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Build & Test (cp312-macosx_arm64, macos-latest)
The job was canceled because "cp311-manylinux_x86_64_ub" failed.
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Build & Test (cp313-win_amd64, windows-latest)
The operation was canceled.
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Build & Test (cp310-win_amd64, windows-latest)
The job was canceled because "cp311-manylinux_x86_64_ub" failed.
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Build & Test (cp312-macosx_arm64, macos-latest)
The operation was canceled.
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Build & Test (cp310-win_amd64, windows-latest)
The operation was canceled.
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Build & Test (cp311-win_amd64, windows-latest)
The job was canceled because "cp311-manylinux_x86_64_ub" failed.
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Build & Test (cp311-win_amd64, windows-latest)
The operation was canceled.
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Build & Test (cp310-macosx_x86_64, macos-latest)
The job was canceled because "cp311-manylinux_x86_64_ub" failed.
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Build & Test (cp310-macosx_x86_64, macos-latest)
The operation was canceled.
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Run benchmarks
Error: failed to execute the benchmark process
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Run benchmarks
Process completed with exit code 1.
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Build documentation
Process completed with exit code 2.
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Test interfaces to databases and applications
Process completed with exit code 1.
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Generate wheels matrix
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Check code style
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Build CCD and wheel for reusing it in several CI jobs
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Build CCD and wheel for reusing it in several CI jobs
No files were found with the provided path: ./src/biotite/structure/info/components.bcif. No artifacts will be uploaded.
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Build & Test (cp311-manylinux_x86_64, ubuntu-latest)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Upload CCD to GitHub Releases
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Build source distribution
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Test interface to Muscle 5
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Test interface to Muscle 5
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Build documentation
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Build documentation
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:200: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Build documentation
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Test interfaces to databases and applications
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
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Test interfaces to databases and applications
/home/runner/miniconda3/lib/python3.12/site-packages/conda/base/context.py:200: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.3.
To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels:
conda config --add channels defaults
For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html
deprecated.topic(
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Test interfaces to databases and applications
The 'defaults' channel might have been added implicitly. If this is intentional, add 'defaults' to the 'channels' list. Otherwise, consider setting 'conda-remove-defaults' to 'true'.
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Artifacts
Produced during runtime
| Name | Size | |
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internal-build
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18 MB |
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