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Merge pull request SCIInstitute#2000 from SCIInstitute/check_conda
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Fix conda install
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akenmorris authored Feb 11, 2023
2 parents 3fec68a + 58ca891 commit 5d2036e
Showing 1 changed file with 2 additions and 1 deletion.
3 changes: 2 additions & 1 deletion install_shapeworks.sh
Original file line number Diff line number Diff line change
Expand Up @@ -105,7 +105,6 @@ function install_conda() {
CONDA_PACKAGES=(python=3.9.13 \
openblas=0.3.20 \
'vtk=9.1.0=qt*' \
scikit-learn=1.1.1 \
pip=22.1.2
)

Expand Down Expand Up @@ -185,6 +184,8 @@ function install_conda() {
if ! pip install SimpleITK==2.1.1.2; then return 1; fi
if ! pip install bokeh==2.4.3; then return 1; fi
if ! pip install seaborn==0.11.2; then return 1; fi
if ! pip install scikit-learn==1.1.1; then return 1; fi

if ! pip install Python/DatasetUtilsPackage; then return 1; fi # install the local GirderConnector code as a package
if ! pip install Python/DocumentationUtilsPackage; then return 1; fi # install shapeworks auto-documentation as a package
if ! pip install Python/DataAugmentationUtilsPackage; then return 1; fi # install data augmentation code as a package
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