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@bokulich-lab

Laboratory of Food Systems Biotechnology

FSB Lab, Institute of Food, Nutrition, and Health, D-HEST, ETH Zurich

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  1. RESCRIPt RESCRIPt Public

    REference Sequence annotation and CuRatIon Pipeline

    Python 84 26

  2. q2-fondue q2-fondue Public

    Functions for reproducibly Obtaining and Normalizing Data re-Used from Elsewhere

    Python 20 6

  3. q2-assembly q2-assembly Public

    QIIME 2 plugin for (meta)genome assembly.

    Python 4 12

  4. q2-moshpit q2-moshpit Public

    MOdular SHotgun metagenome Pipelines with Integrated provenance Tracking

    Python 3 11

Repositories

Showing 10 of 26 repositories
  • q2-amr Public
    bokulich-lab/q2-amr’s past year of commit activity
    Python 1 BSD-3-Clause 1 8 5 Updated Jul 4, 2024
  • q2-moshpit Public

    MOdular SHotgun metagenome Pipelines with Integrated provenance Tracking

    bokulich-lab/q2-moshpit’s past year of commit activity
    Python 3 BSD-3-Clause 11 18 8 Updated Jul 3, 2024
  • q2-viromics Public
    bokulich-lab/q2-viromics’s past year of commit activity
    Python 0 BSD-3-Clause 1 1 0 Updated Jul 3, 2024
  • q2-pinocchio Public
    bokulich-lab/q2-pinocchio’s past year of commit activity
    Python 0 BSD-3-Clause 2 1 0 Updated Jul 3, 2024
  • Fermented-Food-Ontologies Public

    Substrate-based fermented food ontologies

    bokulich-lab/Fermented-Food-Ontologies’s past year of commit activity
    Python 0 CC-BY-4.0 1 0 1 Updated Jul 3, 2024
  • fgcz-metagenomics-workshop Public
    bokulich-lab/fgcz-metagenomics-workshop’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 0 0 0 Updated Jun 26, 2024
  • RESCRIPt Public

    REference Sequence annotation and CuRatIon Pipeline

    bokulich-lab/RESCRIPt’s past year of commit activity
    Python 84 BSD-3-Clause 26 18 0 Updated Jun 24, 2024
  • q2-assembly Public

    QIIME 2 plugin for (meta)genome assembly.

    bokulich-lab/q2-assembly’s past year of commit activity
    Python 4 BSD-3-Clause 12 10 3 Updated Jun 20, 2024
  • FermDB Public
    bokulich-lab/FermDB’s past year of commit activity
    1 BSD-3-Clause 1 0 0 Updated Jun 18, 2024
  • q2-fondue Public

    Functions for reproducibly Obtaining and Normalizing Data re-Used from Elsewhere

    bokulich-lab/q2-fondue’s past year of commit activity
    Python 20 BSD-3-Clause 6 12 2 Updated Jun 13, 2024
View all repositories

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