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108 Open 118 Closed
108 Open 118 Closed
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Issues list

Install issue with scvi dependency
#260 opened Sep 27, 2024 by ERSchultz
Issue on Tutorial Annotation - UMAP is not from Learned Cell Embeddings
#259 opened Sep 24, 2024 by ManuelSokolov
Code to pretrain model from scratch on my own dataset
#257 opened Sep 23, 2024 by igor-sadalski
Assistance Needed with Adding Cell-Type Column to h5ad File for scGPT Hub Submission
#256 opened Sep 19, 2024 by msyed786
Unable to resolve dependencies when fixing the lock file in developer mode
#255 opened Sep 17, 2024 by igor-sadalski
2
layer_data.A in preprocess.y
#254 opened Sep 17, 2024 by sklarz-bgu
2
TypeError: bwd(): incompatible function arguments.
#253 opened Sep 17, 2024 by IchigoJiken
link to raw data origin of Immune Human dataset
#252 opened Sep 16, 2024 by talbCgen
Why is X not standarized using the preprocess() funnction in Tutorial_Reference_Mapping.ipynb?
#251 opened Sep 15, 2024 by Ale9806
Request for FlashAttention v2 Support
#249 opened Sep 13, 2024 by qianachen
about the masking procedure
#248 opened Sep 7, 2024 by FUminlee
2
AttributeError: 'MultiheadAttention' object has no attribute 'Wqkv'
#247 opened Sep 4, 2024 by yuhan1li
Try to reconstruct the exp
#246 opened Sep 2, 2024 by YOU-k
An error when trying to predict perturbations in reploge dataset
#245 opened Aug 30, 2024 by HelloWorldLTY
Poor quality of batch integration
#244 opened Aug 26, 2024 by chrarnold
Bridging the gap: Creating a (corrected and/or imputed) gene expression matrix after the embedding
#243 opened Aug 26, 2024 by chrarnold
About the pertaining part
#242 opened Aug 25, 2024 by FUminlee
Help with the installation on colab
#241 opened Aug 16, 2024 by bitcometz
2
question about gene2idx order
#240 opened Aug 15, 2024 by hongruhu
33 million normal cells not match CELLxGENE census version 15 May 2023
#239 opened Aug 14, 2024 by litxiaoyao
8
expression embeddings tutorial
#237 opened Aug 3, 2024 by cherrysu0999
Chemical perturbation exercise
#236 opened Aug 2, 2024 by 00dylan00
Cell Type Annotation scGPT_Human model state dict not correct
#235 opened Aug 1, 2024 by ManuelSokolov
2
Installation Issues
#232 opened Jul 31, 2024 by liusi2019
1
Perturbation effects on atac/peak region
#231 opened Jul 30, 2024 by Saranya-Balachandran
ProTip! Updated in the last three days: updated:>2024-09-26.