Fix test imports

brainglobe · Nov 6, 2023 · c904166 · c904166
1 parent 2148f13
commit c904166
Show file tree

Hide file tree

Showing 9 changed files with 12 additions and 9 deletions.
diff --git a/tests/conftest.py b/tests/conftest.py
@@ -4,7 +4,7 @@
 import pytest
 from bg_atlasapi import BrainGlobeAtlas
 
-from brainreg_segment.segment import SegmentationWidget
+from brainglobe_segmentation.segment import SegmentationWidget
 
 atlas_name = "allen_mouse_50um"
 brainreg_dir = Path.cwd() / "tests" / "data" / "brainreg_output"

diff --git a/tests/tests/test_integration/test_tracks/test_track_analysis.py b/tests/tests/test_integration/test_tracks/test_track_analysis.py
@@ -3,7 +3,7 @@
 import numpy as np
 import pandas as pd
 
-from brainreg_segment.tracks.analysis import run_track_analysis
+from brainglobe_segmentation.tracks.analysis import run_track_analysis
 
 tracks_dir = Path.cwd() / "tests" / "data" / "tracks"
 

diff --git a/tests/tests/test_unit/test_atlas/test_atlas_utils.py b/tests/tests/test_unit/test_atlas/test_atlas_utils.py
@@ -1,6 +1,6 @@
 import numpy as np
 
-from brainreg_segment.atlas import utils as atlas_utils
+from brainglobe_segmentation.atlas import utils as atlas_utils
 
 atlas_name = "allen_mouse_50um"
 

diff --git a/tests/tests/test_unit/test_image/test_image_utils.py b/tests/tests/test_unit/test_image/test_image_utils.py
@@ -1,6 +1,6 @@
 import numpy as np
 
-from brainreg_segment.image.utils import create_KDTree_from_image
+from brainglobe_segmentation.image.utils import create_KDTree_from_image
 
 image = np.array(
     (

diff --git a/tests/tests/test_unit/test_regions/test_region_IO.py b/tests/tests/test_unit/test_regions/test_region_IO.py
@@ -3,7 +3,7 @@
 
 import tifffile
 
-from brainreg_segment.regions import IO as region_IO
+from brainglobe_segmentation.regions import IO as region_IO
 
 regions_dir = Path.cwd() / "tests" / "data" / "regions"
 VOXEL_SIZE = 100

diff --git a/tests/tests/test_unit/test_regions/test_region_analysis.py b/tests/tests/test_unit/test_regions/test_region_analysis.py
@@ -6,7 +6,7 @@
 import tifffile
 from napari.layers import Labels
 
-from brainreg_segment.regions.analysis import (
+from brainglobe_segmentation.regions.analysis import (
     check_list_only_nones,
     summarise_brain_regions,
     summarise_single_brain_region,

diff --git a/tests/tests/test_unit/test_segmentation_panels/test_regions.py b/tests/tests/test_unit/test_segmentation_panels/test_regions.py
@@ -1,7 +1,7 @@
 import numpy as np
 from napari.layers import Labels
 
-from brainreg_segment.segmentation_panels.regions import (
+from brainglobe_segmentation.segmentation_panels.regions import (
     check_segmentation_in_correct_space,
 )
 

diff --git a/tests/tests/test_unit/test_tracks/test_track_IO.py b/tests/tests/test_unit/test_tracks/test_track_IO.py
@@ -3,7 +3,7 @@
 import numpy as np
 import pandas as pd
 
-from brainreg_segment.tracks import IO
+from brainglobe_segmentation.tracks import IO
 
 tracks_dir = Path.cwd() / "tests" / "data" / "tracks"
 

diff --git a/tests/tests/test_unit/test_tracks/test_track_analysis_tools.py b/tests/tests/test_unit/test_tracks/test_track_analysis_tools.py
@@ -2,7 +2,10 @@
 import pytest
 from pandas import read_csv
 
-from brainreg_segment.tracks.analysis import analyse_track_anatomy, spline_fit
+from brainglobe_segmentation.tracks.analysis import (
+    analyse_track_anatomy,
+    spline_fit,
+)
 
 
 @pytest.fixture