Releases: brainglobe/cellfinder
v1.1.0
Remove Duplicate Function
Removes a duplicated function from the package (#272) and standardises the corresponding calls across other functions within the package.
Various developer-related updates are also going in with this PR, which do not affect anything in the package.
- Reinstating the
brainmapper
CI check, but as an optional check to indicate potential breakages - Additional tests added
- Pre-commit config modified slightly.
What's Changed
- Reinstate brainmapper ci check by @willGraham01 in #347
- Update github link in widget by @adamltyson in #350
- Update tooling config by @adamltyson in #351
- Update tests by @adamltyson in #348
- Prep merge by @adamltyson in #349
Full Changelog: v1.0.0...v1.1.0
v1.0.0
Merging of cellfinder-core
and cellfinder-napari
This package combines the old cellfinder-core
and cellfinder-napari
packages into a single package, called cellfinder
.
You can read more about this merging of functionality on the brainglobe blog.
Additionally, see the full changelog on the brainglobe website for details on what this package offers.
v0.8.1
cellfinder
has migrated!
v0.8.1
marks the end of the cellfinder
package's current lifecycle, as it prepares for it's new role in BrainGlobe version 1.
Users are recommended to head over to brainglobe-workflows
and install that package if they want to continue using the cellfinder
command-line interface.
What's Changed
- Replace
pandas.df.append
withsafe_concat
by @alessandrofelder in #259 - Prepare for migration by @willGraham01 in #261
New Contributors
- @alessandrofelder made their first contribution in #259
Full Changelog: v0.8.0...v0.8.1
Update to comply with `brainreg` v1.0.0
Update to depend on brainreg
v1.0.0
Users may wish to uninstall brainreg-napari
and brainreg-segment
before updating. For details, see our blog post.
What's Changed
- Update to brainreg v1 compliance by @willGraham01 in #255
Full Changelog: v0.7.1...v0.8.0
Version 0.3.12
Main updates
- Windows bug fix thanks to @EmanPaoli
- Prebuilt wheels now released for Linux, Windows and macOS (untested)
Developers
- Update dependencies & refactor usage of amap api
Version 0.3.11
Further refactoring
Version 0.3.10
Minor refactoring
Version 0.3.9
Version 0.3.9 (2020-03-11)
Added
Training can now be saved every N epochs using --checkpoint-interval
Fixed
- Bug fixed in
cellfinder_xml_crop
- Pandas dependencies updated thanks to @amedyukhina
Version 0.3.9rc1
v0.3.9rc1 bump (#74)
Version 0.3.9rc0
v0.3.9rc0 Xml crop fix (#69)