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@fsalbeez fsalbeez released this 13 Nov 19:35
· 29 commits to main since this release
v4.1.0
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Learn about vigilant mode.

Highlights of the 4.1.0 release:
Previously, the 3_SD threshold did not account for potential NTC contamination. In this release, this issue has been resolved and the standard deviation is calculated, per assay, for only the NTCs that have passed the contamination check.

Previously, the Negative & Positive Quality Control Checks produced empty csv files as the output upon the absence of sample or assay flags. In this release, in the absence of a sample or assay-level flag, the Check produces a csv file containing a message informing the users of this conclusion.

Previously, the outputs folder contained all outputs in one location. In this release, the outputs folder has been re-organized into three sub-folders - RESULTS_{IFC_barcode}, R&D_{IFC_barcode}, and QUALITY_CONTROL_{IFC_barcode). The user can explore the desired output based on their analysis needs.

Full list of changes:

  • Fixed input to threshold.py to be assigned_signal_norm_with_NTC_check.csv
  • Built Assay-Level QC Test Explanation file
  • Built PDF generator when running the quality control fags for the Positive and Negative Controls
Assets 2
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