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Update pipeline to generate caids: add gnomAD v4 and update Hail usage #1418

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@nadeaujoshua nadeaujoshua commented Feb 14, 2024

This PR includes 2 updates to the data pipeline that generates a Hail table for caids:

  1. Add gnomAD v4 to the pipeline
  2. Update Hail imports and their usage to be compatible with newer versions of Hail
    • The get_caids module uses a number of Hail utils that have either been changed, removed or replaced since its last update

@nadeaujoshua nadeaujoshua self-assigned this Feb 14, 2024
@nadeaujoshua nadeaujoshua linked an issue Feb 14, 2024 that may be closed by this pull request
@nadeaujoshua nadeaujoshua deleted the jn/update-caids-pipeline-v4 branch February 14, 2024 17:30
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