Move data to cellpainting-gallery

README.md

@@ -100,19 +100,19 @@ Alternatively used example data from DP Github.
 ## Experimental data on S3
 
 - Compressed LINCS images:  
-`s3://jump-cellpainting/projects/2015_10_05_DrugRepurposing_AravindSubramanian_GolubLab_Broad/2016_04_01_a549_48hr_batch1_compressed/images/` 
-- Backup large csv files: `s3://jump-cellpainting/projects/2015_10_05_DrugRepurposing_AravindSubramanian_GolubLab_Broad/workspace/location_backups/`
-- Location files: `s3://jump-cellpainting/projects/2015_10_05_DrugRepurposing_AravindSubramanian_GolubLab_Broad/workspace/deep_learning/inputs/locations/`
-- LINCS sub index: `s3://jump-cellpainting/projects/2015_10_05_DrugRepurposing_AravindSubramanian_GolubLab_Broad/workspace/deep_learning/inputs/metadata/sub_index.csv`
-- full enriched index: `s3://jump-cellpainting/projects/2015_10_05_DrugRepurposing_AravindSubramanian_GolubLab_Broad/workspace/deep_learning/inputs/metadata/enriched_index.csv`
-- logs of experiments: `s3://jump-cellpainting/projects/2015_10_05_DrugRepurposing_AravindSubramanian_GolubLab_Broad/workspace/deep_learning/logs/`
-- models: `s3://jump-cellpainting/projects/2015_10_05_DrugRepurposing_AravindSubramanian_GolubLab_Broad/workspace/deep_learning/models/`
-- LINCS subsets crop (18 million): `s3://jump-cellpainting/projects/2015_10_05_DrugRepurposing_AravindSubramanian_GolubLab_Broad/workspace/deep_learning/crops/`
+`s3://cellpainting-gallery/cpg0004-lincs/broad/2016_04_01_a549_48hr_batch1_compressed/images/` 
+- Backup large csv files: `s3://cellpainting-gallery/cpg0004-lincs/broad/workspace/location_backups/`
+- Location files: `s3://cellpainting-gallery/cpg0004-lincs/broad/workspace/deep_learning/inputs/locations/`
+- LINCS sub index: `s3://cellpainting-gallery/cpg0004-lincs/broad/workspace/deep_learning/inputs/metadata/sub_index.csv`
+- full enriched index: `s3://cellpainting-gallery/cpg0004-lincs/broad/workspace/deep_learning/inputs/metadata/enriched_index.csv`
+- logs of experiments: `s3://cellpainting-gallery/cpg0004-lincs/broad/workspace/deep_learning/logs/`
+- models: `s3://cellpainting-gallery/cpg0004-lincs/broad/workspace/deep_learning/models/`
+- LINCS subsets crop (18 million): `s3://cellpainting-gallery/cpg0004-lincs/broad/workspace/deep_learning/crops/`
 
 
 
 ## Important random things
 - Some information in this repository may be old since the DeepProfiler versions changed midway through the project
-- The single cell crops of all 18 million cells within the LINCS subsection can be found on S3: `s3://jump-cellpainting/projects/2015_10_05_DrugRepurposing_AravindSubramanian_GolubLab_Broad/workspace/deep_learning/outputs/1017_sc/`
+- The single cell crops of all 18 million cells within the LINCS subsection can be found on S3: `s3://cellpainting-gallery/cpg0004-lincs/broad/workspace/deep_learning/outputs/1017_sc/`
 - If you can't reach Michael Bornholdt, try to reach Shantanu Singh.