Release v0.6.1 Patch (#365)

* [GH-1284] Fix docker image generation (#363)

The `Dockerfile` is being invoked in the root directory - we don't need
to add the parent directory, just the current one.

* [GH-1277] Prevent update loop from terminating (#364)

Catch all throwables to make sure a workload failure doesn't bring down
workflow-launcher.

* update changelog + bump patch to v0.6.1

CHANGELOG.md

@@ -1,3 +1,7 @@
+# Release 0.6.1
+- [GH-1277] Prevent update loop from terminating ([#364](https://github.com/broadinstitute/wfl/pull/364))
+- [GH-1284] Fix docker image generation ([#363](https://github.com/broadinstitute/wfl/pull/363))
+
 # Release 0.6.0
 - GH-1282: Document WFL's support for Somatic Genomes. ([#361](https://github.com/broadinstitute/wfl/pull/361))
 - GitHub `develop` infrastructure + release changes ([#356](https://github.com/broadinstitute/wfl/pull/356))

api/Dockerfile

@@ -3,7 +3,7 @@ WORKDIR /tmp
 
 # Note this step requires docker builds in the root repo context
 # e.g. `docker build -t wfl-api:test -f ./api/Dockerfile .`
-ADD .. .
+ADD . .
 RUN make api TARGET=build
 
 # Use a Broad AppSec blessed image for security compliance

api/src/wfl/server.clj

@@ -18,8 +18,7 @@
             [wfl.service.postgres :as postgres]
             [wfl.util :as util]
             [wfl.wfl :as wfl])
-  (:import (java.util.concurrent Future TimeUnit)
-           (org.postgresql.util PSQLException)))
+  (:import (java.util.concurrent Future TimeUnit)))
 
 (def description
   "The purpose of this command."
@@ -88,9 +87,9 @@
               (jdbc/with-db-transaction [tx (postgres/wfl-db-config)]
                 (->> (workloads/load-workload-for-id tx id)
                      (workloads/update-workload! tx)))
-              (catch PSQLException ex
+              (catch Throwable t
                 (log/warnf "Failed to update workload %s" uuid)
-                (log/warn ex))))
+                (log/warn t))))
           (update-workloads! []
             (log/info "updating workloads")
             (run! do-update!

version

@@ -1 +1 @@
-0.6.0
+0.6.1