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Fix the qualifier for the QUANT step and minor typo
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The original input qualifier for index ("path") would only run one sample, changing it to "each" will run all samples when running the Nextflow file.
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chiasinL authored Sep 25, 2024
1 parent 6ce95f9 commit 892a2a2
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4 changes: 2 additions & 2 deletions episodes/11-Simple_Rna-Seq_pipeline.md
Original file line number Diff line number Diff line change
Expand Up @@ -489,7 +489,7 @@ The script `script4.nf`;
process QUANT {
input:
path index
each index
tuple val(pair_id), path(reads)
output:
Expand Down Expand Up @@ -731,7 +731,7 @@ ch1.collect().view()

::::::::::::::::::::::::::::::::::::::: challenge

## Combing operators
## Combining operators

Which is the correct way to combined `mix` and `collect` operators so that you have a single channel with one List item?

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