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Paper for JOSE in progress #99

Merged
merged 18 commits into from
Jun 12, 2023
Merged

Paper for JOSE in progress #99

merged 18 commits into from
Jun 12, 2023

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ewallace
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@ewallace ewallace commented Jan 24, 2023

This pull request, currently in draft, fixes #95.

  • create paper.md file to be used for JOSE submission
  • add title, keywords, author list, acknowledgements
  • add ORCIDs for authors
  • draft summary following JOSE learning module guidelines
  • References as paper.bib, starting with the Good Enough Practices paper
  • Test that paper compiles using https://whedon.theoj.org/
  • Request reviews from co-authors.

Summary:
- Capitalise GitHub

Learning objectives, design, and experience
- Capitalise Good Enough Practices as in this context it's bein used as the workshop title
- Capitalise Git

How the lesson came to be:
- Capitalise Git (x2)
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@emma-wilson emma-wilson left a comment

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The paper looks really good! I've created a pull request with some minor changes (capitalising words) #110

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Also can confirm that my author details are correct.

ewallace and others added 3 commits June 7, 2023 15:57
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@ameynert ameynert left a comment

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I merged in a few edits and added a ref to the project organization and management for genomics lesson, which is a nice practical application of the principles taught here.

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ewallace commented Jun 9, 2023

@ameynert thank you, this looks great. Do you have funder information to add?

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ameynert commented Jun 9, 2023

@ameynert thank you, this looks great. Do you have funder information to add?

Just the Ed-DaSH for this, I think.

@ewallace ewallace marked this pull request as ready for review June 12, 2023 13:13
@ewallace ewallace merged commit 513ced6 into gh-pages Jun 12, 2023
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@ewallace ewallace deleted the jose-paper-95 branch June 12, 2023 20:38
zkamvar pushed a commit that referenced this pull request Aug 31, 2023
* Create paper.md

* Draft institutions and ORCIDs in paper.md

* Affiliations in paper.md

Drafted all co-authors affiliations

* Summary in paper.md

Draft Summary of paper.md and block out remaining sections based on JOSE guidelines.

* Draft all sections of paper.md

Does not do citations properly, yet

* bibliography draft in paper.bib

* citations and clarifications in paper.md

* syntax in paper.bib

* syntax in paper.bib again

* reformat author emails

* Fix formatting in paper.md

* Capitalise words

Summary:
- Capitalise GitHub

Learning objectives, design, and experience
- Capitalise Good Enough Practices as in this context it's bein used as the workshop title
- Capitalise Git

How the lesson came to be:
- Capitalise Git (x2)

* Minor edits and addition of reference to Project Management and Organization for Genomics

* brackets in paper.bib

* Add polish letter to Tomasz's name

* typos and minor wording updates in paper.md

---------

Co-authored-by: Emma Wilson <[email protected]>
Co-authored-by: ameynert <[email protected]>
Co-authored-by: Tomasz Zielinski <[email protected]>
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Prepare paper.md and paper.bib for JOSE submission
4 participants