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Added activation information: method name, energy, reaction time
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MSFileToolbox/src/umich/ms/datatypes/scan/props/ActivationInfo.java
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| /* | ||
| * Copyright (c) 2016 Dmitry Avtonomov | ||
| * | ||
| * Licensed under the Apache License, Version 2.0 (the "License"); | ||
| * you may not use this file except in compliance with the License. | ||
| * You may obtain a copy of the License at | ||
| * | ||
| * http://www.apache.org/licenses/LICENSE-2.0 | ||
| * | ||
| * Unless required by applicable law or agreed to in writing, software | ||
| * distributed under the License is distributed on an "AS IS" BASIS, | ||
| * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. | ||
| * See the License for the specific language governing permissions and | ||
| * limitations under the License. | ||
| */ | ||
|
|
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| package umich.ms.datatypes.scan.props; | ||
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| /** | ||
| * @author Dmitry Avtonomov | ||
| */ | ||
| public class ActivationInfo { | ||
| private String activationMethod; | ||
| private Double activationEnergyLo; | ||
| private Double activationEnergyHi; | ||
| private Double activationTime; | ||
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| public String getActivationMethod() { | ||
| return activationMethod; | ||
| } | ||
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| public void setActivationMethod(String activationMethod) { | ||
| this.activationMethod = activationMethod; | ||
| } | ||
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| /** Either the beginning of the collision energy ramp or just the collision energy. In electronvolts. */ | ||
| public Double getActivationEnergyLo() { | ||
| return activationEnergyLo; | ||
| } | ||
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| /** Either the beginning of the collision energy ramp or just the collision energy. In electronvolts. */ | ||
| public void setActivationEnergyLo(Double activationEnergyLo) { | ||
| this.activationEnergyLo = activationEnergyLo; | ||
| } | ||
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| /** Either the end of the collision energy ramp or just the collision energy. In electronvolts. */ | ||
| public Double getActivationEnergyHi() { | ||
| return activationEnergyHi; | ||
| } | ||
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| /** Either the end of the collision energy ramp or just the collision energy. In electronvolts. */ | ||
| public void setActivationEnergyHi(Double activationEnergyHi) { | ||
| this.activationEnergyHi = activationEnergyHi; | ||
| } | ||
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| /** This would mean different things for different activation methods and might not be present most of the time. */ | ||
| public Double getActivationTime() { | ||
| return activationTime; | ||
| } | ||
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| public void setActivationTime(Double activationTime) { | ||
| this.activationTime = activationTime; | ||
| } | ||
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| @Override | ||
| public String toString() { | ||
| if (activationTime == null) | ||
| return String.format("Activation:%s@[%.2f-%.2f]", activationMethod, activationEnergyLo, activationEnergyHi); | ||
| else | ||
| return String.format("Activation:%s@[%.2f-%.2f] for %.2f", activationMethod, activationEnergyLo, activationEnergyHi, activationTime); | ||
| } | ||
| } |
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