… specific interventions (#563)

* Adding fixed interventions as input to `optimize`

* Update optimize_interface.ipynb

* Adding integration utility to combine interventions

* Adding deepcopy for fixed interventions

* Update intervention_builder.py

* Sw output (#565)

* simplify intervention splicing

* lint

* removed test

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Co-authored-by: Sam Witty <[email protected]>

* Update optimize_interface.ipynb

* Adding tests for using fixed intervention with optimize

* Simplify interchange dictionary processing (#564) (#566)

* simplify intervention splicing

* lint

* removed test

Co-authored-by: Sam Witty <[email protected]>

* Update test_interfaces.py

* updating name for combining interventions

* Update ouu.py

* lint

* update tests to use new name for combining interventions

* lint

* Update optimize_interface.ipynb

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Co-authored-by: Sam Witty <[email protected]>

* set the minimum value of the NormalNoiseModel variance

* lint

* mixed up minimum and maximum

* real lint

* Add ensemble output formatting

* Adding support for cumulative states

* Updated CDC reformatting

* using deepcopy to avoid overwriting results

* linting

* Lint

* fix time unit issue in cdc formatting

* updated defaults

* Lint

* Update result_processing.py

* update for time_unit

* Update result_processing.py

* Update result_processing.py

* Update result_processing.py

* lint

* update tests to match output from `convert_to_output_format`

* Update result_processing.py

* Update result_processing.py

* Update result_processing.py

* Update result_processing.py

* Update result_processing.py

* Update interfaces.py

* update alpha_qs type to Sized

* updating alpha_qs type to List

* Update result_processing.py

* Update result_processing.py

* lint

* fix warning

* Update interfaces.ipynb

* Dropping all other states/observables except the ones in `solution_string_mapping`

* Updating logging_times to include start_time and end_time in ensemble_sample

* Updating how to set train_end_point

* lint

* Update interfaces.ipynb

* Update interfaces.ipynb

* fixed failing tests (#571)

* Update interfaces.ipynb

* Fixing tests with expanded timespan

* Lint

* resolved viz test time misalignment (#573)

* Removing commented out code; update documentation for ensemble_sample

* replaced DEFAULT_ALPHA_QS with import

* lint

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Co-authored-by: Sam Witty <[email protected]>