Update createMSP to use median mz and RT values #143
Triggered via pull request
August 29, 2023 13:14
Tomnl
Status
Cancelled
Total duration
58m 26s
Artifacts
–
Annotations
11 errors and 41 warnings
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windows-latest (devel)
unable to load R code in package 'MSnbase'
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windows-latest (devel)
unable to load R code in package 'MSnbase'
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windows-latest (devel)
processing vignette 'msPurity-lcmsms-data-processing-and-spectral-matching-vignette.Rmd' failed with diagnostics:
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windows-latest (devel)
processing vignette 'msPurity-vignette.Rmd' failed with diagnostics:
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windows-latest (devel)
Vignette re-building failed.
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windows-latest (devel)
Failed to install 'msPurity' from local:
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windows-latest (devel)
Process completed with exit code 1.
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ubuntu-latest (devel)
The run was canceled by @Tomnl.
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ubuntu-latest (devel)
The operation was canceled.
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macOS-latest (devel)
The run was canceled by @Tomnl.
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macOS-latest (devel)
The operation was canceled.
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/bioc/bin/windows/contrib/4.4:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.4:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/windows/contrib/4.4:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/windows/contrib/4.4:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/books/bin/windows/contrib/4.4:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/bioc/bin/windows/contrib/4.4:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.4:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/windows/contrib/4.4:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/windows/contrib/4.4:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/books/bin/windows/contrib/4.4:
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windows-latest (devel)
No files were found with the provided path: check. No artifacts will be uploaded.
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/bioc/bin/windows/contrib/4.4:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.4:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/windows/contrib/4.4:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/windows/contrib/4.4:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/books/bin/windows/contrib/4.4:
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windows-latest (devel)
namespace 'MSnbase' is not available and has been replaced
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windows-latest (devel)
namespace 'MSnbase' is not available and has been replaced
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/bioc/bin/windows/contrib/4.4:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/windows/contrib/4.4:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/windows/contrib/4.4:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/windows/contrib/4.4:
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windows-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/books/bin/windows/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://cloud.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/bioc/bin/macosx/big-sur-x86_64/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-x86_64/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-x86_64/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/books/bin/macosx/big-sur-x86_64/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://cloud.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/bioc/bin/macosx/big-sur-x86_64/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-x86_64/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-x86_64/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/bioc/bin/macosx/big-sur-x86_64/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/bin/macosx/big-sur-x86_64/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/bin/macosx/big-sur-x86_64/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/workflows/bin/macosx/big-sur-x86_64/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://bioconductor.org/packages/3.17/books/bin/macosx/big-sur-x86_64/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://cloud.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.4:
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macOS-latest (devel)
unable to access index for repository https://cloud.r-project.org/bin/macosx/big-sur-x86_64/contrib/4.4:
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