Use same CytoDataFrame in multiple Jupyter cells (#131) #90
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| # used for publishing documentation on push to main or published release | |
| name: publish docs | |
| on: | |
| push: | |
| branches: | |
| - main | |
| release: | |
| types: | |
| - published | |
| jobs: | |
| build: | |
| # only build and deploy docs if the actor is not dependabot | |
| if: ${{ github.actor != 'dependabot[bot]' }} | |
| runs-on: ubuntu-24.04 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.11" | |
| - name: Setup for poetry | |
| run: | | |
| python -m pip install poetry poetry-dynamic-versioning | |
| - name: Simulate version tag for cosmicqc install compatibility | |
| run: | | |
| poetry version 99.0.0 | |
| - name: poetry deps | |
| run: poetry install | |
| - name: Build documentation | |
| run: | | |
| mkdir pages | |
| touch pages/.nojekyll | |
| cd docs | |
| poetry run sphinx-build src build | |
| # remove any doctrees dirs which aren't needed for publishing | |
| find ./build -type d -name '.doctrees' -exec rm -rf {} + | |
| cp -r build/* ../pages/ | |
| - name: Deploy documentation | |
| uses: JamesIves/github-pages-deploy-action@v4 | |
| with: | |
| branch: pages | |
| folder: pages | |
| - name: Reset version to 0.0.0 | |
| run: | | |
| poetry version 0.0.0 |