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link to cloud lesson for log-in instructions
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@@ -55,49 +55,20 @@ In this lesson you will learn how to use the command line interface to move arou | |
On a Mac or Linux machine, you can access a shell through a program called Terminal, which is already available | ||
on your computer. If you're using Windows, you'll need to download a separate program to access the shell. | ||
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> ## Accessing the shell | ||
> **Mac** | ||
> On Mac the shell is available through Terminal | ||
> Applications -> Utilities -> Terminal | ||
> (Shortcut: Type `command + spacebar` to open Spotlight Search then type terminal and press enter to open the application.) | ||
> You can drag the Terminal application to your Dock for easy access. | ||
> | ||
> **Windows** | ||
> For Windows, we're going to be using gitbash. | ||
> Download and install [gitbash](http://msysgit.github.io). | ||
> Open up the program. | ||
> | ||
> **Linux** | ||
> The shell is available by default when you connect to your AWS instance. | ||
{: .callout} | ||
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## Starting with the shell | ||
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We will spend most of our time learning about the basics of the shell | ||
by manipulating some experimental data. | ||
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Some of the data we're going to be working with is quite large, and | ||
by manipulating some experimental data. Some of the data we're going to be working with is quite large, and | ||
we're also going to be using several bioinformatics packages in later | ||
lessons to work with this data. To avoid having to spend time | ||
downloading the data and downloading and installing all of the software, | ||
we're going to be working with data on a remote server. | ||
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You can log-in to the remote server using the information that your instructor has pasted into the Etherpad. First | ||
open your shell (through the Terminal application) and then enter the text starting | ||
with `ssh` from the Etherpad. Each of you will have a different log-in. This will | ||
prevent us from accidentally changing each other's files as we work through the | ||
exercises. For example, you might type: | ||
You can log-in to the remote server using the instructions | ||
[here](http://www.datacarpentry.org/cloud-genomics/02-logging-onto-cloud/#logging-onto-a-cloud-instance). | ||
Your instructor will supply the ip_address and password that you need to login. | ||
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~~~ | ||
$ ssh [email protected] | ||
~~~ | ||
{: .bash} | ||
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Make sure you replace `ec2-34-229-196-68.compute-1.amazonaws.com` with your individual log-in. | ||
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You will be prompted to enter a password. The password will be provided to you by your instructor. | ||
Each of you will have a different ip_address. This will | ||
prevent us from accidentally changing each other's files as we work through the | ||
exercises. The password will be the same for everyone. | ||
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After loging on, you will see a screen showing something like this: | ||
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