Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Remove curation table + update tutorial & devcontainer #58

Open
wants to merge 25 commits into
base: main
Choose a base branch
from
Open

Remove curation table + update tutorial & devcontainer #58

wants to merge 25 commits into from

Conversation

kushalbakshi
Copy link
Collaborator

No description provided.

kushalbakshi and others added 25 commits June 18, 2024 13:20
@kushalbakshi
Update(setup.py) element-interface branch to resolve installation con…
7cfc720 
…flicts
@kushalbakshi
Ingest Inscopix metadata
589f3d3
@kushalbakshi
Fix(miniscopy.py) TypeError
63dccf6
@kushalbakshi
Remove CaImAn install from setup.py
2149c8c
@kushalbakshi
Update tables in miniscope schema + update devcontainer for codespaces
2d7418b
@kushalbakshi
Attempt caiman install from dockerfile during devcontainer build
e9ba34f
@kushalbakshi
Clone and install caiman in image build
715fed7
@kushalbakshi
Install caiman in the devcontainer image
b954899
@kushalbakshi
Update devcontainer to python 3.10
dd4a397
@kushalbakshi
Fix(devcontainer.json) imaging -> miniscope
d321be1
@kushalbakshi
Merge branch 'dev_update_element' of https://github.com/kushalbakshi/…
b39fe9e 
…element-miniscope into dev_update_element
@kushalbakshi
Update PYTHON_VERSION env
914a55d
@kushalbakshi
Merge branch 'dev_update_element' of https://github.com/kushalbakshi/…
46d6d61 
…element-miniscope into dev_update_element
@kushalbakshi
Create no_curation module
a393a38
@kushalbakshi
Update with changes from code review and testing
b566fd9
@kushalbakshi
Apply Black formatting
80845ef
@kushalbakshi @ttngu207
Update element_miniscope/miniscope_no_curation.py
9afedbb 
Co-authored-by: Thinh Nguyen <[email protected]>
@kushalbakshi
Remove updated key_source for Processing table
e5358cb
@kushalbakshi
Update foreign key reference in miniscope_report
42c52bd
@kushalbakshi
Fix(miniscope_no_curation.py) session directory handling in `infer_ou…
05b36a7 
…tput_dir()`
@kushalbakshi
Remove input hash generation in Processing
1603fb7
@kushalbakshi
Remove redundant as_posix() for output_dir
0fdd66f
@kushalbakshi
Change Curation to ProcessingTask in get_loader_result()
52fae0f
@kushalbakshi
insert() -> `insert1() for MotionCorrection.Summary
a7d6b9c
@kushalbakshi
Fix fluo_channel -> fluorescence_channel
0a4ecdc
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Reviewers
No reviews
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

Successfully merging this pull request may close these issues.
1 participant
@kushalbakshi