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Add Codespaces tutorial + general updates to the Element #13

Merged
merged 27 commits into from
Jan 19, 2024
Merged

Add Codespaces tutorial + general updates to the Element #13

merged 27 commits into from
Jan 19, 2024

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kushalbakshi
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@kushalbakshi kushalbakshi commented Jan 5, 2024 •
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This PR adds a Codespaces tutorial and makes general updates throughout the Element to standardize it across other DataJoint Elements. This PR adds or updates:

  • Tutorial notebook
  • Devcontainer configuration to be used in Codespaces
  • GitHub actions no longer release to PyPI
  • setup.py now contains dependencies and extras
  • Updated version.py and CHANGELOG
  • Other changes to make Element more consistent with other DataJoint Elements

kushalbakshi and others added 27 commits January 3, 2024 16:11
@kushalbakshi
Add DevContainer + general updates
9d60f83
@kushalbakshi
Update image names, notebook, tutorial pipeline
af90520
@kushalbakshi
Black formatting
dd7e778
@kushalbakshi
Update pipeline + notebook within codespace
321bd65
@kushalbakshi
Complete optogenetics tutorial notebook
cfa8a37
@kushalbakshi
Apply black formatting
d943684
@kushalbakshi
Remove PyPI release from GHA
9819406
@kushalbakshi
Minor fixes to tutorial notebook
93bb6d4
@kushalbakshi
Test removing s3fs for devcontainer
ae9cf14
@kushalbakshi
Fix extras_require and create devcontainer command
195c60e
@kushalbakshi
Minor fixes to tutorial notebook
3f7b15b
@kushalbakshi
Update README
109e2e8
@kushalbakshi
Update diagram_flowchart.drawio
1ba3a62
@kushalbakshi
Change diagram_flowchart to diagram
730c1ec
@kushalbakshi
Update reference to diagram in tutorial notebook
06730de
@kushalbakshi
Update diagram.drawio
07e4b2d
@kushalbakshi
Added diagram_flowchart.svg
bbbc9bd
@kushalbakshi
Update diagrams
f8275dd
@kushalbakshi
Added flowchart.svg
0991c99
@kushalbakshi
Save flowchart.svg
6612c3b
@kushalbakshi
Update flowchart.svg
444ec91
@kushalbakshi
Update flowchart.svg
54d134a
@kushalbakshi
Update flowchart.drawio
7729e98
@kushalbakshi
Update flowchart.drawio
17554a6
@kushalbakshi
Added flowchart.svg
f8339d4
@kushalbakshi
Update CHANGELOG and version
93c3208
@kushalbakshi
Merge branch 'main' of https://github.com/kushalbakshi/element-optoge…
d2366d0 
…netics
@kushalbakshi kushalbakshi marked this pull request as ready for review January 19, 2024 15:50
@ttngu207 ttngu207 merged commit f9ce4c2 into datajoint:main Jan 19, 2024
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@ttngu207 ttngu207 ttngu207 approved these changes

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@kushalbakshi @ttngu207