feat(io.utils): use user-specified nd2 files
#18
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # This workflows will upload a Python Package using Twine when a release is created | |
| # For more information see: https://help.github.com/en/actions/language-and-framework-guides/using-python-with-github-actions#publishing-to-package-registries | |
| name: tests | |
| on: | |
| push: | |
| branches: | |
| - main | |
| tags: | |
| - "v*" # Push events to matching v*, i.e. v1.0, v20.15.10 | |
| pull_request: | |
| branches: | |
| - main | |
| workflow_dispatch: | |
| jobs: | |
| test: | |
| name: ${{ matrix.platform }} py${{ matrix.python-version }} | |
| runs-on: ${{ matrix.platform }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| platform: [ubuntu-latest, windows-latest, macos-latest] | |
| python-version: [3.8, 3.9] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| # these libraries, along with pytest-xvfb (added in the `deps` in tox.ini), | |
| # enable testing on Qt on linux | |
| - name: Install Linux libraries | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y libdbus-1-3 libxkbcommon-x11-0 libxcb-icccm4 \ | |
| libxcb-image0 libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 \ | |
| libxcb-xinerama0 libxcb-xinput0 libxcb-xfixes0 pkg-config libhdf5-103 libhdf5-dev \ | |
| libegl1 | |
| # strategy borrowed from vispy for installing opengl libs on windows | |
| - name: Install Windows OpenGL | |
| if: runner.os == 'Windows' | |
| run: | | |
| git clone --depth 1 https://www.github.com/pyvista/gl-ci-helpers.git | |
| powershell gl-ci-helpers/appveyor/install_opengl.ps1 | |
| # note: if you need dependencies from conda, considering using | |
| # setup-miniconda: https://github.com/conda-incubator/setup-miniconda | |
| # and | |
| # tox-conda: https://github.com/tox-dev/tox-conda | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install wheel setuptools tox tox-gh-actions | |
| pip install pydrive2 py # Added py due to pytest tox issues requiring py module. | |
| - name: Test with tox | |
| run: tox | |
| env: | |
| PLATFORM: ${{ matrix.platform }} | |
| # ONLY UNCOMMENT SECTION BELOW FOR DEBUGGING PURPOSES: allows one to ssh into host machine. | |
| # Follow instructions in https://docs.github.com/en/authentication/connecting-to-github-with-ssh/adding-a-new-ssh-key-to-your-github-account | |
| # to add your ssh keys. | |
| # - name: Job failed. Activating debugging mode via up-term. | |
| # if: ${{ failure() }} | |
| # uses: lhotari/action-upterm@v1 | |
| # with: | |
| # ## limits ssh access and adds the ssh public key for the user which triggered the workflow | |
| # limit-access-to-actor: true | |
| # ## limits ssh access and adds the ssh public keys of the listed GitHub users | |
| # limit-access-to-users: chriski777, carsen-stringera | |
| - name: Coverage | |
| # Only run coverage once | |
| if: runner.os == 'Linux' | |
| uses: codecov/codecov-action@v1 | |
| deploy: | |
| # this will run when you have tagged a commit, starting with "v*" | |
| # and requires that you have put your twine API key in your | |
| # github secrets (see readme for details) | |
| needs: [test] | |
| runs-on: ubuntu-latest | |
| if: contains(github.ref, 'tags') | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.x" | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -U setuptools setuptools_scm wheel twine | |
| - name: Build and publish | |
| env: | |
| TWINE_USERNAME: __token__ | |
| TWINE_PASSWORD: ${{ secrets.TWINE_API_KEY }} | |
| run: | | |
| git tag | |
| python setup.py sdist bdist_wheel | |
| twine upload dist/* |