Releases: davidcsterratt/retistruct
VERSION 0.7.4 - Released 2023/02/04
CHANGES IN VERSION 0.7.4 - Released 2023/02/04
BUG FIX
- Renamed deprecated rgl.*functions,
which were causing a crash in the GUI
CHANGES IN VERSION 0.7.3 - Released 2020/09/12
BUG FIXES
-
Fix regression that caused the stitching to fail on some retinae with depthmaps
-
Titration reinstated
(#29)
NEW FEATURES
-
Determine the background value of depthmaps automatically
-
Allow minimum and maxium size of window for infering missing valus
in depthmaps to be specified
VERSION 0.6.4 - Released 2023/02/04
CHANGES IN VERSION 0.6.4 - Released 2023/02/04
BUG FIX
- Renamed deprecated rgl.*functions,
which were causing a crash in the GUI
CHANGES IN VERSION 0.6.3 - Released 2020/04/03
BUG FIX
- Error due to change in stringsAsFactors
(#49)
VERSION 0.7.2 - Released 2020/08/31
BUG FIXES
-
Fix regression in v0.7.1 that caused some mulit-fragment outlines to fail
-
Improve image interpolation
VERSION 0.7.1 - Released 2020/08/28
NEW FEATURE
- Stitching together of fragments that contain a hole in the centre
is now possible
VERSION 0.7.0 - Released 2020/08/26
NEW FEATURES
-
Stitching together separate petals or "fragments"
-
Ability to magnify plots in the GUI
-
Depthmaps, i.e. the ability to specify the depth at various points
of an image, for more accurate reconstruction. -
Switch easily between 3D views of flatmount and reconstruction in
GUI
VERSION 0.6.2 - Released 2019/12/13
VERSION 0.6.1 - Released 2019/12/08
NEW FEATURES
-
Allow resizing of windows (#34)
-
Allow data counts to be read in using ijroi and csv formats (#37)
-
Expose the mapping from flat coordinates to spherical coordinates in reconstruected retina (#20)
This is achieved by the new member function mapFlatToSpherical() of a ReconstructedOutline object
BUG FIXES
VERSION 0.6.0 - Released 2019/07/10
BUG FIXES
- Error unclear with infinite determinant in retistruct.reconstruct
(#21)
Thanks to Brian Cohn for reporting this, and to Inmaculada Soldado
and Klaudia Szatko for reporting the same problem and contributing
an example that gave the same error.
CODE IMPROVEMENTS
-
Major refactor of code to use R6 classes (#25)
-
Stitching algorithm changed so it only creates new points when they lie outwith tolerance a of an existing one. This prevents very short lengths in triangulated outlines.
(#21) This work arose from the bug with the indefinite determinant (see above).
NEW FEATURES
- It is now possible to have completely silent operation
(#22)
Thanks to Brian Cohn for the suggestion
VERSION 0.5.12 - Released 2017/08/08
VERSION 0.5.11 - Released 2017/07/15
RELEASE NOTES
-
R 3.4.0 is required to run the graphical user interface (GUI),
because there is no version of the RGtk2 package that works with
earlier versions of R available on CRAN. -
There is a bug in version 1.0.5 of gWidgets2RGtk that prevents the GUI
working. If you encounter this problem, work around it by typinginstall.packages("gWidgets2RGtk2")
in the R console and then running retistruct() again. (You may need
to quit R befor being able to run this command.) More information
at: #13
NEW FEATURES
- The CSV input format can now take a file of counts (or "grouped") data
(#7)
Thanks to Nicolas Nagoo for the report.
BUG FIXES
-
3D (RGL) plot now appears after reconstruction
(#5)
Thanks to Nicolas Nagoo for the report. -
gWidgets2RGtk not found and package.dependencies() is deprecated
(#12) -
gWidgets2::gdroplist is deprecated
(#10) -
Test failed buiding on Windows i386
(#14) -
Issue with adding tears in retistruct
(#11)
Thanks to https://github.com/sagewiltse for the report.
CODE IMPROVEMENTS
- gWidgets2 is now used instead of gWidgets. Thanks to John Verzani
for fixing bugs in gWidgets2.