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Releases: davidcsterratt/retistruct

VERSION 0.7.4 - Released 2023/02/04

04 Feb 11:21
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CHANGES IN VERSION 0.7.4 - Released 2023/02/04

BUG FIX

  • Renamed deprecated rgl.*functions,
    which were causing a crash in the GUI

CHANGES IN VERSION 0.7.3 - Released 2020/09/12

BUG FIXES

  • Fix regression that caused the stitching to fail on some retinae with depthmaps

  • Titration reinstated
    (#29)

NEW FEATURES

  • Determine the background value of depthmaps automatically

  • Allow minimum and maxium size of window for infering missing valus
    in depthmaps to be specified

VERSION 0.6.4 - Released 2023/02/04

04 Feb 11:14
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CHANGES IN VERSION 0.6.4 - Released 2023/02/04

BUG FIX

  • Renamed deprecated rgl.*functions,
    which were causing a crash in the GUI

CHANGES IN VERSION 0.6.3 - Released 2020/04/03

BUG FIX

  • Error due to change in stringsAsFactors
    (#49)

VERSION 0.7.2 - Released 2020/08/31

31 Aug 21:01
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Pre-release

BUG FIXES

  • Fix regression in v0.7.1 that caused some mulit-fragment outlines to fail

  • Improve image interpolation

VERSION 0.7.1 - Released 2020/08/28

31 Aug 20:16
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Pre-release

NEW FEATURE

  • Stitching together of fragments that contain a hole in the centre
    is now possible

VERSION 0.7.0 - Released 2020/08/26

31 Aug 20:16
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Pre-release

NEW FEATURES

  • Stitching together separate petals or "fragments"

  • Ability to magnify plots in the GUI

  • Depthmaps, i.e. the ability to specify the depth at various points
    of an image, for more accurate reconstruction.

  • Switch easily between 3D views of flatmount and reconstruction in
    GUI

VERSION 0.6.2 - Released 2019/12/13

16 Dec 18:11
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NEW FEATURES

  • Improved documentation of the API
    (#47)
    Thanks to improvements in roxygen2, the class hierarchy can be viewed
    using help.start()

BUG FIXES

  • Check problems on Debian systems
    (#48)
    Thanks to the CRAN maintainers for reporting this problem

VERSION 0.6.1 - Released 2019/12/08

09 Dec 10:14
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NEW FEATURES

  • Allow resizing of windows (#34)

  • Allow data counts to be read in using ijroi and csv formats (#37)

  • Expose the mapping from flat coordinates to spherical coordinates in reconstruected retina (#20)
    This is achieved by the new member function mapFlatToSpherical() of a ReconstructedOutline object

BUG FIXES

  • Reinstated saving reconstructed data (#27)

  • Reinstated sphericalplot (#28)

  • retistruct.batch.summary() fails on retinae without CountSets (#30)

VERSION 0.6.0 - Released 2019/07/10

10 Jul 17:27
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BUG FIXES

  • Error unclear with infinite determinant in retistruct.reconstruct
    (#21)
    Thanks to Brian Cohn for reporting this, and to Inmaculada Soldado
    and Klaudia Szatko for reporting the same problem and contributing
    an example that gave the same error.

CODE IMPROVEMENTS

  • Major refactor of code to use R6 classes (#25)

  • Stitching algorithm changed so it only creates new points when they lie outwith tolerance a of an existing one. This prevents very short lengths in triangulated outlines.
    (#21) This work arose from the bug with the indefinite determinant (see above).

NEW FEATURES

  • It is now possible to have completely silent operation
    (#22)
    Thanks to Brian Cohn for the suggestion

VERSION 0.5.12 - Released 2017/08/08

11 Aug 20:19
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NEW FEATURES

  • AnnotatedOutline() and Outline() are exported to allow use with
    external packages
    (#17)
    Thanks to Brian Cohn for the report and the patch.

BUG FIXES

  • Documentation has been spell checked using devtools::spell_check()
    (#19)

VERSION 0.5.11 - Released 2017/07/15

18 Jul 11:31
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RELEASE NOTES

  • R 3.4.0 is required to run the graphical user interface (GUI),
    because there is no version of the RGtk2 package that works with
    earlier versions of R available on CRAN.

  • There is a bug in version 1.0.5 of gWidgets2RGtk that prevents the GUI
    working. If you encounter this problem, work around it by typing

    install.packages("gWidgets2RGtk2")

    in the R console and then running retistruct() again. (You may need
    to quit R befor being able to run this command.) More information
    at: #13

NEW FEATURES

  • The CSV input format can now take a file of counts (or "grouped") data
    (#7)
    Thanks to Nicolas Nagoo for the report.

BUG FIXES

  • 3D (RGL) plot now appears after reconstruction
    (#5)
    Thanks to Nicolas Nagoo for the report.

  • gWidgets2RGtk not found and package.dependencies() is deprecated
    (#12)

  • gWidgets2::gdroplist is deprecated
    (#10)

  • Test failed buiding on Windows i386
    (#14)

  • Issue with adding tears in retistruct
    (#11)
    Thanks to https://github.com/sagewiltse for the report.

CODE IMPROVEMENTS

  • gWidgets2 is now used instead of gWidgets. Thanks to John Verzani
    for fixing bugs in gWidgets2.