fix artificial cell testsing, fix broken tests

glia/_cli.py

@@ -28,7 +28,7 @@ def compile():
             ),
         )
         click.echo("Testing assets ...")
-    test(*_manager.resolver.index.keys(), standalone_mode=False)
+    test(_manager.resolver.index.keys(), standalone_mode=False)
 
 
 @glia.command("list")

glia/_glia.py

@@ -143,7 +143,7 @@ def start(self):
         self.compile(check_cache=True)
 
     @_requires_install
-    def package(self, name):
+    def package(self, name) -> Package:
         for pkg in self.packages:
             if pkg.name == name:
                 return pkg
@@ -262,7 +262,11 @@ def test_mechanism(self, mechanism):
         """
         try:
             s = self.h.Section()
-            self.insert(s, mechanism)
+            mod = self._resolve_mod(mechanism)
+            if mod.is_artificial_cell:
+                getattr(self.h, mod.mod_name)
+            else:
+                self.insert(s, mechanism)
         except ValueError as e:
             if str(e).find("argument not a density mechanism name") != -1:
                 raise LibraryError(mechanism + " mechanism could not be inserted.")

tests/test_cli.py

@@ -26,8 +26,6 @@ def import_tmp_package(path):
     spec = importlib.util.spec_from_file_location("__test_package__", path)
     m = importlib.util.module_from_spec(spec)
     spec.loader.exec_module(m)
-    print(Path(m.__file__).read_text())
-    print("module?", m, dir(m), m.__file__)
     return m.package
 
 
@@ -59,7 +57,6 @@ def test_compile_nopkg(self):
 
     def test_list(self):
         result = run_cli_command(["list"])
-        print(result.output, result.exit_code, result.exception)
         self.assertEqual(0, result.exit_code)
 
     @_shared.skipUnlessTestMods

tests/test_glia.py

@@ -17,20 +17,19 @@ class TestPackageDiscovery(unittest.TestCase):
     def test_discovery(self):
         self.assertGreater(len(glia._manager.packages), 0)
 
-    def test_caching(self):
-        cache = read_cache()
-        # Check whether the directory hash for `glia_test_mods` is present.
-        self.assertTrue(
-            any(["glia_test_mods" in hash for hash in cache["mod_hashes"].keys()])
-        )
-
 
 class TestCompilation(unittest.TestCase):
     @classmethod
     def setUpClass(cls):
         super().setUpClass()
         glia.compile()
 
+    def test_caching(self):
+        # Test whether the compilation was cached
+        cache = read_cache()
+        pkg = glia._manager.package("glia_test_mods")
+        self.assertEqual(pkg.mod_hash, cache["mod_hashes"].get(pkg.hash))
+
     def test_compilation(self):
         # Check that the library files exist
         for path in glia._manager.get_libraries():