set env vars multiple times #443
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| name: Tests | |
| on: | |
| push: | |
| branches: | |
| - main | |
| paths: | |
| - src/** | |
| pull_request: | |
| branches: | |
| - main | |
| paths: | |
| - src/** | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| persist-credentials: false | |
| fetch-depth: 0 | |
| - name: Set up Python 3.8 | |
| uses: actions/setup-python@v1 | |
| with: | |
| python-version: 3.8 | |
| - uses: actions/cache@v2 | |
| with: | |
| path: ~/.cache/pip | |
| key: ${{ runner.os }}-pip-${{ hashFiles('setup.py') }} | |
| restore-keys: | | |
| ${{ runner.os }}-pip- | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install .[dev] | |
| # Test the py:light -> ipynb -> py:light round trip conversion | |
| - name: roundtrip conversion test | |
| run: jupytext src/tess_atlas/notebook_controllers/templates/toi_template.py --to notebook --test | |
| # Verify pre-commits valid | |
| - name: pre-commit | |
| run: pre-commit run --all-files --verbose --show-diff-on-failure | |
| # Run all test other than ones marked as "slow" | |
| - name: pytest | |
| run: | | |
| pytest tests/ --cov=tess_atlas --cov-report=xml --cov-report=term-missing:skip-covered | tee pytest-coverage.txt | |
| if: always() | |
| - name: Pytest coverage comment | |
| if: ${{ github.ref == 'refs/heads/main' }} | |
| id: coverageComment | |
| uses: MishaKav/pytest-coverage-comment@main | |
| with: | |
| hide-comment: true | |
| pytest-coverage-path: ./pytest-coverage.txt | |
| - name: Update Readme with Coverage Html | |
| if: ${{ github.ref == 'refs/heads/main' }} | |
| run: | | |
| sed -i '/<!-- Pytest Coverage Comment:Begin -->/,/<!-- Pytest Coverage Comment:End -->/c\<!-- Pytest Coverage Comment:Begin -->\n\${{ steps.coverageComment.outputs.content }}\n<!-- Pytest Coverage Comment:End -->' ./README.md | |
| - name: Commit & Push changes to Readme | |
| if: ${{ github.ref == 'refs/heads/main' }} | |
| uses: actions-js/push@master | |
| with: | |
| message: Update coverage on Readme | |
| github_token: ${{ secrets.GITHUB_TOKEN }} |