attempt at adding custom css

.gitignore

@@ -60,3 +60,5 @@ theano_cache
 .coverage*
 *.xml
 *.txt
+src/tess_atlas/notebook_controllers/templates/*.ipybn
+src/tess_atlas/notebook_controllers/templates/*.md

src/tess_atlas/notebook_controllers/templates/menu_page.py

@@ -2,7 +2,7 @@
 # ---
 # jupyter:
 #   jupytext:
-#     formats: ipynb,py:light
+#     formats: ipynb,py:light,md
 #     text_representation:
 #       extension: .py
 #       format_name: light
@@ -26,7 +26,7 @@
 #
 # Each TOI’s analysis has its own page. Access them from the table below.
 #
-# + tags=[ "remove-input"]
+# + tags=["remove-input"]
 from itables import init_notebook_mode, show
 
 from tess_atlas.data.analysis_summary import AnalysisSummary
@@ -36,7 +36,7 @@
     "{{{SUMMARY_PATH}}}"
 ).generate_summary_table()
 
-# + tags=[ "remove-input"]
+# + tags=["remove-input"]
 show(
     summary_df,
     caption="TESS Atlas Catalog Summary",
@@ -68,3 +68,16 @@
 # [1]: https://exoplanetarchive.ipac.caltech.edu/docs/API_toi_columns.html
 # [2]: https://exofop.ipac.caltech.edu/tess/view_toi.php#
 #
+# -
+
+# <!--COMMENTS WITH Utterance.es-->
+# <!--FIXME: dont seem to be working atm :(-->
+# ```{raw} html
+# <script src="https://utteranc.es/client.js"
+#         repo="avivajpeyi/tess-atlas"
+#         issue-term="title"
+#         theme="github-light"
+#         crossorigin="anonymous"
+#         async>
+# </script>
+# ```

src/tess_atlas/notebook_controllers/templates/toi_template.py

@@ -7,7 +7,7 @@
 #       extension: .py
 #       format_name: light
 #       format_version: '1.5'
-#       jupytext_version: 1.10.3
+#       jupytext_version: 1.14.5
 #   kernelspec:
 #     display_name: Python 3 (ipykernel)
 #     language: python
@@ -363,3 +363,16 @@ def run_inference(model) -> InferenceData:
 
 # + pycharm={"name": "#%%\n"} tags=["exe", "output_scroll"]
 citations.print_packages()
+# -
+
+# <!--## Comments-->
+# <!--FIXME: dont seem to be working atm :(-->
+# ```{raw} html
+# <script src="https://utteranc.es/client.js"
+#         repo="avivajpeyi/tess-atlas"
+#         issue-term="title"
+#         theme="github-light"
+#         crossorigin="anonymous"
+#         async>
+# </script>
+# ```

src/tess_atlas/webbuilder/template/_static/custom.css

@@ -0,0 +1,23 @@
+/*Prevent scrollbar on left sidebar*/
+#sidebar {
+    overflow: hidden;
+}
+
+/* Sidebar */
+.wy-nav-side {
+  background: #ff0000;
+}
+
+
+body {
+    /* ... */
+}
+
+/*Test to see if this is actually being picked up anything works*/
+/*h1 {*/
+/*    color: #003B71 !important;*/
+/*}*/
+/*^Above _does_ seem to work*/
+
+
+/*At the bottom add javascript */

src/tess_atlas/webbuilder/template/_static/custom.js

@@ -0,0 +1,7 @@
+// <script src="https://utteranc.es/client.js"
+//         repo="avivajpeyi/tess-atlas"
+//         issue-term="title"
+//         theme="github-light"
+//         crossOrigin="anonymous"
+//         async>
+// </script>

src/tess_atlas/webbuilder/template/conf.py

@@ -7,6 +7,7 @@
 html_logo = "_static/atlas_logo.png"
 html_favicon = "_static/atlas_logo.png"
 release = "1"
+# templates_path = ["_templates"]
 extensions = [
     "myst_nb",
     "sphinx_comments",
@@ -29,19 +30,29 @@
     show_prev_next=False,
     home_page_in_toc=True,
     toc_title=project,
-    # navbar_end= ["paperbutton.html"],
+    # navbar_end=["paperbutton.html", "navbar-icon-links"],
+    navbar_end=["navbar-icon-links"],
+    launch_buttons=dict(colab_url="https://colab.research.google.com"),
 )
-# templates_path = ["_templates"]
+
 
 html_sidebars = {"**": ["navbar-logo.html", "sbt-sidebar-nav.html"]}
 html_static_path = ["_static"]
-
+html_css_files = ["custom.css"]
+html_js_files = ["custom.js"]
 html_permalinks = True
 html_sourcelink_suffix = ""
 numfig = True
 panels_add_bootstrap_css = True
 suppress_warnings = ["myst.domains"]
 html_copy_source = False
 remove_from_toctrees = ["content/toi_notebooks/toi_*.ipynb"]
+comments_config = {
+    "utterances": {
+        "repo": "avivajpeyi/tess-atlas",  # as https://utteranc.es/ not installed in dfm/tess-atlas atm
+        "optional": "config",
+        "label": "comment",
+    }
+}
 
 # https://stackoverflow.com/questions/55297443/including-notebook-with-nbsphinx-fails/70474616#70474616