Update frontend default to 4.1

drpowell · Oct 18, 2019 · 92ffdbc · 92ffdbc
1 parent 7513f01
commit 92ffdbc
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Showing 35 changed files with 1,214 additions and 2 deletions.
diff --git a/app/controllers/application_controller.rb b/app/controllers/application_controller.rb
@@ -53,7 +53,7 @@ def degust_compare_url(version, id)
     def dir_for_version(version)
       case version
       when ''
-        "degust-frontend/degust-dist-3.1"
+        "degust-frontend/degust-dist-4.1"
       when 'dev'
         "degust-frontend/degust-dist"
       else
@@ -62,7 +62,7 @@ def dir_for_version(version)
     end
 
     def frontend_versions
-      ['3.1', 'dev']
+      ['4.1', '3.1', 'dev']
     end
     helper_method :frontend_versions, :dir_for_version, :degust_compare_url
 

diff --git a/degust-frontend/degust-dist-4.1/compare.html b/degust-frontend/degust-dist-4.1/compare.html
@@ -0,0 +1,25 @@
+<html>
+  <head profile="http://www.w3.org/2005/10/profile">
+    <link rel="icon" type="image/png" href="images/favicon.png"/>
+
+    <!-- Externals CSS -->
+    <link rel="stylesheet" href='./css/lib.css' />
+
+    <link rel="stylesheet" href='./css/common.css' type="text/css" />
+    <link rel="stylesheet" href='./css/compare.css' type="text/css "/>
+  </head>
+  <body>
+    <div id="replace-me" class="container">
+      <div class="jumbotron">
+        <h1>Degust</h1>
+        <p><a href='http://drpowell.github.io/degust/'>Degust</a> is preparing your data...  prepare for degustation...</p>
+        <img src='./images/front-loader.gif'>
+      </div>
+    </div>
+
+    <script type="text/javascript">
+      window.settings = { };
+    </script>
+    <script type="text/javascript" src='./compare.js'></script>
+  </body>
+</html>
diff --git a/degust-frontend/degust-dist-4.1/compare.js b/degust-frontend/degust-dist-4.1/compare.js
diff --git a/degust-frontend/degust-dist-4.1/config.html b/degust-frontend/degust-dist-4.1/config.html
@@ -0,0 +1,16 @@
+<html>
+  <head profile="http://www.w3.org/2005/10/profile">
+    <meta charset="UTF-8">
+    <link rel="icon" type="image/png" href="images/favicon.png"/>
+
+    <!-- Externals CSS -->
+    <link rel="stylesheet" href="./css/lib.css" />
+
+    <link rel="stylesheet" href="./css/common.css" type="text/css"/>
+  </head>
+  <body>
+    <div id='app'></div>
+
+    <script type="text/javascript" src='./config.js'></script>
+  </body>
+</html>
diff --git a/degust-frontend/degust-dist-4.1/config.js b/degust-frontend/degust-dist-4.1/config.js
diff --git a/degust-frontend/degust-dist-4.1/css/common.css b/degust-frontend/degust-dist-4.1/css/common.css
@@ -0,0 +1,150 @@
+
+.btn-inverse { color: #fff; background-color: #333; border-color: #555; }
+.btn-inverse:hover { background-color: #fff; }
+
+div#beta { position: relative; height: 0}
+#beta img { position: relative; width: 150px; top: -55px; left: -90px;}
+.supported-by a { display: block; }
+
+div#forkme { position: relative; height: 0 }
+#forkme img { position: absolute; top: -48px; right: -60px; border: 0; }
+
+/* Override bootstrap popover z-index to ensure it is on top of the navbar */
+.popover { z-index: 1090; }
+
+
+/*  ****************************************************/
+.warning-popover {
+    position: relative;
+    top: 70px;
+    z-index: 1100;
+}
+
+.warning-popover .browser-warning {
+    position: absolute;
+    width: 700px;
+    left: 50%;
+    margin-left: -350px;
+}
+
+.browser-warning {
+    background-color: #eaa;
+    padding: 5px 20px;
+}
+
+/* Fix slickgrid & bootstrap 3 incompatibility ******************************/
+
+#grid, #grid div {
+  -webkit-box-sizing: content-box;
+     -moz-box-sizing: content-box;
+          box-sizing: content-box;
+}
+
+
+/* Vue tooltips ******************************/
+
+.v-tooltip {
+    display: block !important;
+    z-index: 11000;
+  }
+
+  .v-tooltip .tooltip-inner {
+    background: black;
+    color: white;
+    border-radius: 16px;
+    padding: 5px 10px 4px;
+  }
+
+  .v-tooltip .tooltip-arrow {
+    width: 0;
+    height: 0;
+    border-style: solid;
+    position: absolute;
+    margin: 5px;
+    border-color: black;
+    z-index: 1;
+  }
+
+  .v-tooltip[x-placement^="top"] {
+    margin-bottom: 5px;
+  }
+
+  .v-tooltip[x-placement^="top"] .tooltip-arrow {
+    border-width: 5px 5px 0 5px;
+    border-left-color: transparent !important;
+    border-right-color: transparent !important;
+    border-bottom-color: transparent !important;
+    bottom: -5px;
+    left: calc(50% - 5px);
+    margin-top: 0;
+    margin-bottom: 0;
+  }
+
+  .v-tooltip[x-placement^="bottom"] {
+    margin-top: 5px;
+  }
+
+  .v-tooltip[x-placement^="bottom"] .tooltip-arrow {
+    border-width: 0 5px 5px 5px;
+    border-left-color: transparent !important;
+    border-right-color: transparent !important;
+    border-top-color: transparent !important;
+    top: -5px;
+    left: calc(50% - 5px);
+    margin-top: 0;
+    margin-bottom: 0;
+  }
+
+  .v-tooltip[x-placement^="right"] {
+    margin-left: 5px;
+  }
+
+  .v-tooltip[x-placement^="right"] .tooltip-arrow {
+    border-width: 5px 5px 5px 0;
+    border-left-color: transparent !important;
+    border-top-color: transparent !important;
+    border-bottom-color: transparent !important;
+    left: -5px;
+    top: calc(50% - 5px);
+    margin-left: 0;
+    margin-right: 0;
+  }
+
+  .v-tooltip[x-placement^="left"] {
+    margin-right: 5px;
+  }
+
+  .v-tooltip[x-placement^="left"] .tooltip-arrow {
+    border-width: 5px 0 5px 5px;
+    border-top-color: transparent !important;
+    border-right-color: transparent !important;
+    border-bottom-color: transparent !important;
+    right: -5px;
+    top: calc(50% - 5px);
+    margin-left: 0;
+    margin-right: 0;
+  }
+
+  .v-tooltip.popover .popover-inner {
+    background: #f9f9f9;
+    color: black;
+    padding: 24px;
+    border-radius: 5px;
+    box-shadow: 0 5px 30px rgba(black, .1);
+  }
+
+  .v-tooltip.popover .popover-arrow {
+    border-color: #f9f9f9;
+  }
+
+  .v-tooltip[aria-hidden='true'] {
+    visibility: hidden;
+    opacity: 0;
+    transition: opacity .15s, visibility .15s;
+  }
+
+  .v-tooltip[aria-hidden='false'] {
+    visibility: visible;
+    opacity: 1;
+    transition: opacity .15s;
+  }
diff --git a/degust-frontend/degust-dist-4.1/css/compare.css b/degust-frontend/degust-dist-4.1/css/compare.css
@@ -0,0 +1,70 @@
+
+#main-loading { position: absolute; top: 100px; left: 250px; }
+
+.genesets-toggle, #genesets {display: none;}
+.geneset-save { width: 100%;}
+.geneset-search input.search { width: 150px; margin: 5px 0;}
+.geneset-search .ui-autocomplete-loading {
+    background: white url("images/ui-anim_basic_16x16.gif") right center no-repeat;
+}
+.weights {font-size: 12px;}
+.weights .name {font-weight: bold; text-align: right; width: 95px; display: inline-block; margin-right: 10px;}
+.weights .val { width:20px; width: 50px; display: inline-block;}
+.weights-toggle { margin-top: 8px; font-size: 10px; }
+
+div.right { float: right; }
+div.filter { font-size: 8pt; border: 1px solid #aaa; border-radius: 5px; background-color: #eee; padding: 0 3px; margin-top: 15px}
+.filter label, .filter input { display: inline-block; font-size: 8pt; }
+.filter select { display: inline-block; font-size: 8pt; max-width: 200px; }
+.filter label { width: 70px; text-align: right; }
+.filter input { width: 50px; }
+.kegg-filter { display: none; }
+.filter input.error { background-color: #fbb; }
+
+.ec-group { display: none; }
+
+.neg  { height: 100%; background-color: #ddf; }
+.pos  { height: 100%; background-color: #fdd; }
+
+.ui-dialog .ui-state-hover { border: 0; }
+
+.error-msg, .error-input { font-size: 11px; }
+
+
+.warning { background-color: red; }
+
+/* Tour ***********************************************************************/
+.popover.wide { max-width: 460px; }
+
+/* Print overlay ***********************************************************************/
+.print-popup {
+        position: absolute;
+        background-color: #f2f2f2;
+        border-radius: 4px;
+
+        padding: 20px;
+        font-family: Arial, sans-serif;
+        font-size: 14px;
+        border: 1px solid #d4d4d4;
+        width: 400px;
+        margin-left: -200px;     /* For centering */
+        left: 50%;
+        top: 300px;
+
+        z-index:11200;
+}
+
+.print-backdrop {
+        position: fixed;
+        top:0;
+        bottom: 0;
+        left: 0;
+        right: 0;
+        background-color: black;
+        opacity: 0.4;
+        z-index: 200;
+}
+
+.print-popup label {
+    width: 80px;
+}
diff --git a/degust-frontend/degust-dist-4.1/css/fonts/glyphicons-halflings-regular.ttf b/degust-frontend/degust-dist-4.1/css/fonts/glyphicons-halflings-regular.ttf
diff --git a/degust-frontend/degust-dist-4.1/css/fonts/glyphicons-halflings-regular.woff b/degust-frontend/degust-dist-4.1/css/fonts/glyphicons-halflings-regular.woff
diff --git a/degust-frontend/degust-dist-4.1/css/fonts/glyphicons-halflings-regular.woff2 b/degust-frontend/degust-dist-4.1/css/fonts/glyphicons-halflings-regular.woff2
diff --git a/degust-frontend/degust-dist-4.1/css/images/glyphicons-halflings-white.png b/degust-frontend/degust-dist-4.1/css/images/glyphicons-halflings-white.png
diff --git a/degust-frontend/degust-dist-4.1/css/images/glyphicons-halflings.png b/degust-frontend/degust-dist-4.1/css/images/glyphicons-halflings.png
diff --git a/degust-frontend/degust-dist-4.1/css/images/sort-asc.gif b/degust-frontend/degust-dist-4.1/css/images/sort-asc.gif
diff --git a/degust-frontend/degust-dist-4.1/css/images/sort-desc.gif b/degust-frontend/degust-dist-4.1/css/images/sort-desc.gif
diff --git a/degust-frontend/degust-dist-4.1/css/images/ui-anim_basic_16x16.gif b/degust-frontend/degust-dist-4.1/css/images/ui-anim_basic_16x16.gif
diff --git a/degust-frontend/degust-dist-4.1/css/images/ui-bg_flat_0_aaaaaa_40x100.png b/degust-frontend/degust-dist-4.1/css/images/ui-bg_flat_0_aaaaaa_40x100.png
diff --git a/degust-frontend/degust-dist-4.1/css/images/ui-bg_flat_75_ffffff_40x100.png b/degust-frontend/degust-dist-4.1/css/images/ui-bg_flat_75_ffffff_40x100.png
diff --git a/degust-frontend/degust-dist-4.1/css/images/ui-bg_glass_55_fbf9ee_1x400.png b/degust-frontend/degust-dist-4.1/css/images/ui-bg_glass_55_fbf9ee_1x400.png
diff --git a/degust-frontend/degust-dist-4.1/css/images/ui-bg_glass_65_ffffff_1x400.png b/degust-frontend/degust-dist-4.1/css/images/ui-bg_glass_65_ffffff_1x400.png
diff --git a/degust-frontend/degust-dist-4.1/css/images/ui-bg_glass_75_dadada_1x400.png b/degust-frontend/degust-dist-4.1/css/images/ui-bg_glass_75_dadada_1x400.png
diff --git a/degust-frontend/degust-dist-4.1/css/images/ui-bg_glass_75_e6e6e6_1x400.png b/degust-frontend/degust-dist-4.1/css/images/ui-bg_glass_75_e6e6e6_1x400.png
diff --git a/degust-frontend/degust-dist-4.1/css/images/ui-bg_glass_95_fef1ec_1x400.png b/degust-frontend/degust-dist-4.1/css/images/ui-bg_glass_95_fef1ec_1x400.png
diff --git a/...st-frontend/degust-dist-4.1/css/images/ui-bg_highlight-soft_75_cccccc_1x100.png b/...st-frontend/degust-dist-4.1/css/images/ui-bg_highlight-soft_75_cccccc_1x100.png
diff --git a/degust-frontend/degust-dist-4.1/css/images/ui-icons_222222_256x240.png b/degust-frontend/degust-dist-4.1/css/images/ui-icons_222222_256x240.png
diff --git a/degust-frontend/degust-dist-4.1/css/images/ui-icons_2e83ff_256x240.png b/degust-frontend/degust-dist-4.1/css/images/ui-icons_2e83ff_256x240.png
diff --git a/degust-frontend/degust-dist-4.1/css/images/ui-icons_454545_256x240.png b/degust-frontend/degust-dist-4.1/css/images/ui-icons_454545_256x240.png
diff --git a/degust-frontend/degust-dist-4.1/css/images/ui-icons_888888_256x240.png b/degust-frontend/degust-dist-4.1/css/images/ui-icons_888888_256x240.png
diff --git a/degust-frontend/degust-dist-4.1/css/images/ui-icons_cd0a0a_256x240.png b/degust-frontend/degust-dist-4.1/css/images/ui-icons_cd0a0a_256x240.png
diff --git a/degust-frontend/degust-dist-4.1/css/lib.css b/degust-frontend/degust-dist-4.1/css/lib.css
diff --git a/degust-frontend/degust-dist-4.1/images/ajax-loader.gif b/degust-frontend/degust-dist-4.1/images/ajax-loader.gif
diff --git a/degust-frontend/degust-dist-4.1/images/beta-testing-image.png b/degust-frontend/degust-dist-4.1/images/beta-testing-image.png
diff --git a/degust-frontend/degust-dist-4.1/images/favicon.png b/degust-frontend/degust-dist-4.1/images/favicon.png
diff --git a/degust-frontend/degust-dist-4.1/images/front-loader.gif b/degust-frontend/degust-dist-4.1/images/front-loader.gif
diff --git a/degust-frontend/degust-dist-4.1/lib.css.js b/degust-frontend/degust-dist-4.1/lib.css.js
diff --git a/degust-frontend/degust-dist-4.1/three.js b/degust-frontend/degust-dist-4.1/three.js