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Fix file manager import and example (#410)
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* resolve import issue + examples updated with renamed functions

* update version
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@laura-borghesi-lum00n
laura-borghesi-lum00n authored Dec 20, 2024
1 parent edac7d3 commit 9d6d629
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Showing 14 changed files with 28 additions and 28 deletions.
2 changes: 1 addition & 1 deletion README.md
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## Dicom Image Toolkit for CornerstoneJS

### Current version: 3.0.0-beta.1
### Current version: 3.0.0-beta.2

### Latest Published Release: 2.7.3

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4 changes: 2 additions & 2 deletions docs/examples/4d.html
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let seriesId = _.keys(seriesStack)[0];
let serie = seriesStack[seriesId];
larvitar.populateLarvitarManager(seriesId, serie);
let manager = larvitar.getLarvitarManager();
let manager = larvitar.getImageManager();
let multiFrameSerie = manager[seriesId];
let frameId = 0;
larvitar
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let seriesId = _.keys(seriesStack)[0];
let serie = seriesStack[seriesId];
larvitar.populateLarvitarManager(seriesId, serie);
let manager = larvitar.getLarvitarManager();
let manager = larvitar.getImageManager();
let multiFrameSerie = manager[seriesId];
let frameId = 0;
larvitar
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6 changes: 3 additions & 3 deletions docs/examples/base.html
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Expand Up @@ -448,7 +448,7 @@ <h1 style="text-align: center; color: #28b47f; font-weight: bold">
function getMetadata() {
const modal = document.getElementById("metadataModal");
const tableBody = document.querySelector("#metadataTable tbody");
const stack = larvitar.getLarvitarManager();
const stack = larvitar.getImageManager();
const seriesId = larvitar.store.get([
"viewports",
"viewer",
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});

function previousImage() {
const stack = larvitar.getLarvitarManager();
const stack = larvitar.getImageManager();
const seriesIds = Object.keys(stack);
const seriesId = larvitar.store.get([
"viewports",
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}

function nextImage() {
const stack = larvitar.getLarvitarManager();
const stack = larvitar.getImageManager();
const seriesIds = Object.keys(stack);
const seriesId = larvitar.store.get([
"viewports",
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2 changes: 1 addition & 1 deletion docs/examples/dsa.html
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let seriesId = _.keys(seriesStack)[0];
let serie = seriesStack[seriesId];
larvitar.populateLarvitarManager(seriesId, serie);
let manager = larvitar.getLarvitarManager();
let manager = larvitar.getImageManager();
let multiFrameSerie = manager[seriesId];

let frameId = 0;
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4 changes: 2 additions & 2 deletions docs/examples/ecg.html
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let seriesId = _.keys(seriesStack)[0];
let serie = seriesStack[seriesId];
larvitar.populateLarvitarManager(seriesId, serie);
let manager = larvitar.getLarvitarManager();
let manager = larvitar.getImageManager();
let multiFrameSerie = manager[seriesId];
let frameId = 0;
// check if the series has waveform data
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let seriesId = _.keys(seriesStack)[0];
let serie = seriesStack[seriesId];
larvitar.populateLarvitarManager(seriesId, serie);
let manager = larvitar.getLarvitarManager();
let manager = larvitar.getImageManager();
let multiFrameSerie = manager[seriesId];

let frameId = 0;
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4 changes: 2 additions & 2 deletions docs/examples/external.html
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}

function renderSerie() {
larvitar.resetLarvitarManager();
larvitar.resetImageManager();
larvitar
.readFiles(demoFiles)
.then(seriesStack => {
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}

function renderSerie() {
larvitar.resetLarvitarManager();
larvitar.resetImageManager();
larvitar
.readFiles(demoFiles)
.then(seriesStack => {
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2 changes: 1 addition & 1 deletion docs/examples/layers.html
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let serie_2 = { ...seriesStack[seriesId] };
larvitar.populateLarvitarManager(seriesId, serie_1);
larvitar.populateLarvitarManager(seriesId, serie_2);
let manager = larvitar.getLarvitarManager();
let manager = larvitar.getImageManager();
console.log(manager);
layer_1 = larvitar.buildLayer(serie_1, "main");
layer_2 = larvitar.buildLayer(serie_2, "colored", {
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4 changes: 2 additions & 2 deletions docs/examples/masks.html
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}

function renderSerie() {
larvitar.resetLarvitarManager();
larvitar.resetImageManager();
larvitar.readFiles(demoFiles, function (seriesStack, err) {
if (seriesStack) {
// render the first series of the study
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}

function renderSerie() {
larvitar.resetLarvitarManager();
larvitar.resetImageManager();
larvitar
.readFiles(demoFiles)
.then(seriesStack => {
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4 changes: 2 additions & 2 deletions docs/examples/multiframe.html
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Expand Up @@ -122,7 +122,7 @@
let seriesId = _.keys(seriesStack)[0];
let serie = seriesStack[seriesId];
larvitar.populateLarvitarManager(seriesId, serie);
let manager = larvitar.getLarvitarManager();
let manager = larvitar.getImageManager();
let multiFrameSerie = manager[seriesId];

let frameId = 0;
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let seriesId = _.keys(seriesStack)[0];
let serie = seriesStack[seriesId];
larvitar.populateLarvitarManager(seriesId, serie);
let manager = larvitar.getLarvitarManager();
let manager = larvitar.getImageManager();
let multiFrameSerie = manager[seriesId];

let frameId = 0;
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12 changes: 6 additions & 6 deletions docs/examples/pdf.html
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larvitar.store.addViewport("viewer");

function renderPDF() {
larvitar.resetLarvitarManager();
larvitar.resetImageManager();
larvitar
.readFile(demoFiles[0])
.then(image => {
larvitar.updateLarvitarManager(image);
let manager = larvitar.getLarvitarManager();
larvitar.updateImageManager(image);
let manager = larvitar.getImageManager();
let serie =
manager["1.2.276.0.7230010.3.1.3.296485376.1.1664404001.305752"];
larvitar.renderDICOMPDF(serie, "viewer", true).then(() => {
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larvitar.store.addViewport("viewer");

function renderPDF() {
larvitar.resetLarvitarManager();
larvitar.resetImageManager();
larvitar
.readFile(demoFiles[0])
.then(image => {
larvitar.updateLarvitarManager(image);
let manager = larvitar.getLarvitarManager();
larvitar.updateImageManager(image);
let manager = larvitar.getImageManager();
let serie =
manager["1.2.276.0.7230010.3.1.3.296485376.1.1664404001.305752"];
larvitar.renderDICOMPDF(serie, "viewer", true).then(() => {
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4 changes: 2 additions & 2 deletions docs/examples/segmentationTools.html
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}

async function renderSerie() {
larvitar.resetLarvitarManager();
larvitar.resetImageManager();
larvitar
.readFiles(demoFiles)
.then(seriesStack => {
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}

async function renderSerie() {
larvitar.resetLarvitarManager();
larvitar.resetImageManager();
const seriesStack = await larvitar.readFiles(demoFiles);
// render the first series of the study
let seriesId = _.keys(seriesStack)[0];
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4 changes: 2 additions & 2 deletions docs/examples/watershedSegmentationTool.html
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}

async function renderSerie() {
larvitar.resetLarvitarManager();
larvitar.resetImageManager();
larvitar
.readFiles(demoFiles)
.then(seriesStack => {
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}

async function renderSerie() {
larvitar.resetLarvitarManager();
larvitar.resetImageManager();
larvitar
.readFiles(demoFiles)
.then(seriesStack => {
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2 changes: 1 addition & 1 deletion imaging/loaders/fileLoader.ts
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*/

// external libraries
import { cornerstoneFileImageLoader } from "cornerstone-file-image-loader";
import cornerstoneFileImageLoader from "cornerstone-file-image-loader";

// internal libraries
import { clearImageCache } from "../imageRendering";
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2 changes: 1 addition & 1 deletion package.json
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"medical",
"cornerstone"
],
"version": "3.0.0-beta.1",
"version": "3.0.0-beta.2",
"description": "typescript library for parsing, loading, rendering and interacting with DICOM images",
"repository": {
"url": "https://github.com/dvisionlab/Larvitar.git",
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