Add more leniency for files that don't add proper cv

because those bad files are in the wild.
eclipse-chemclipse · Jan 8, 2025 · 4c58db7 · 4c58db7
1 parent b937b73
commit 4c58db7
Showing 1 changed file with 3 additions and 2 deletions.
diff --git a/...se/chemclipse/msd/converter/supplier/mzdata/internal/io/MassSpectrumReaderVersion105.java b/...se/chemclipse/msd/converter/supplier/mzdata/internal/io/MassSpectrumReaderVersion105.java
@@ -104,8 +104,9 @@ private void readProcessingMethod(Description description, IStandaloneMassSpectr
 		}
 		for(Object object : processingMethod.getCvParamOrUserParam()) {
 			if(object instanceof CvParamType cvParamType) {
-				if(cvParamType.getName().equals("peakProcessing")) {
-					if(cvParamType.getValue().equals("centroided")) {
+				// also support poorly standardized files
+				if(cvParamType.getName().toLowerCase().contains("peakprocessing")) {
+					if(cvParamType.getValue().toLowerCase().contains("centroid")) {
 						massSpectrum.setMassSpectrumType(MassSpectrumType.CENTROID);
 					}
 				}