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farid-zare/README.md

👋 Hey, I'm Farid!

PhD Student | Computational & Systems Biology

I am a PhD researcher at the University of Galway, specializing in computational biology and systems biology. My research focuses on genome-scale modeling, optimization, and decision-making in clinical trials. I actively contribute to the COBRA Toolbox and Recon4IMD projects.

🔬 Research Interests

  • 🧪 Computational Biology & Systems Biology
  • 🔬 Genome-Scale Metabolic Modeling
  • 📊 Optimization & Algorithm Development
  • 🧠 Biological Network Analysis
  • 🏥 Metabolic Disease Modeling

🚀 Current Projects

  • 🧬 COBRA Toolbox – A comprehensive framework for constraint-based modeling.
  • 🏥 Recon4IMD – A genome-scale metabolic model for inborn metabolic diseases.

📊 GitHub Stats

GitHub Stats Top Languages

"Modeling biology, one constraint at a time."

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  1. cobratoolbox cobratoolbox Public

    Forked from opencobra/cobratoolbox

    The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:

    MATLAB

  2. opencobra/cobratoolbox opencobra/cobratoolbox Public

    The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:

    MATLAB 257 323

  3. matlab-codecov-example matlab-codecov-example Public

    Forked from mathworks/matlab-codecov-example

    Use MATLAB with Codecov

    MATLAB 1

  4. github-test-reporter github-test-reporter Public

    Forked from ctrf-io/github-test-reporter

    Publish and view test reporting directly in your GitHub Actions CI/CD workflow and Pull Requests with detailed test summaries, failed test analyses, and flaky test detection.

    TypeScript