Implement mari

[keiranjprice101]

closes #61

Description

This PR implements the majority of the mari functionality, with one part left untested.
The part that is untested will be covered in #71 post meeting with Duc

What is complete and tested in this PR:

• Introduction of new extraction pattern - outlined and documented in README - This prevents unecessarily double ingesting nexus files.
• Adding MARI specific inputs - These are added from the nexus files, if none exist on the nexus file, it will populate the default values
• Small Qualit of life change - Test paramerisation for ingestion

As a new issue is opened from this, there is an overall coverage drop of 2%, but this will be remedied post #71

[codecov]

Codecov Report

Patch coverage: 88.05% and project coverage change: -2.08 ⚠️

Comparison is base (20592b7) 97.06% compared to head (808d619) 94.99%.

Additional details and impacted files

@@            Coverage Diff             @@
##             main      #68      +/-   ##
==========================================
- Coverage   97.06%   94.99%   -2.08%     
==========================================
  Files          18       19       +1     
  Lines         579      719     +140     
==========================================
+ Hits          562      683     +121     
- Misses         17       36      +19     

Impacted Files	Coverage Δ
rundetection/rules/mari_rules.py	37.03% <37.03%> (ø)
rundetection/run_detection.py	94.54% <50.00%> (-1.69%)	⬇️
rundetection/rules/factory.py	80.00% <80.00%> (ø)
rundetection/ingest.py	100.00% <100.00%> (ø)
test/test_ingest.py	99.05% <100.00%> (+1.32%)	⬆️
test/test_specifications.py	100.00% <100.00%> (ø)

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