Update meta-corruption with ImgFile fixes and dependency updates #1164

jchris · 2025-09-21T02:13:46Z

Summary

Rebases the meta-corruption investigation branch onto latest dependency updates
Includes the ImgFile cache management fixes and stable content key implementation
Preserves all meta-corruption debugging and logging enhancements

Changes

Enhanced ImgFile component with content-aware cleanup and stable CID-based keys
All meta-corruption investigation logging and assertions
Latest dependency updates from deps-20250918 branch

🤖 Generated with Claude Code

…ication The JWKS endpoint returns {"keys":[{...}]} but the code was trying to use the entire response as a single JWK. This caused JWT verification to fail. Changes: - Parse JWKS response as {keys: JsonWebKey[]} - Use the first key from the keys array (standard practice) - Add validation to ensure keys array is not empty - Simplify code by removing unnecessary kid matching logic 🤖 Generated with [Claude Code](https://claude.ai/code) Co-Authored-By: Claude <[email protected]>

Instead of requiring hardcoded JWKS URLs, automatically discover the JWKS endpoint from the JWT's issuer field. This makes the system more robust across different Clerk instances (dev, prod, etc). Changes: - Extract issuer from JWT payload automatically - Construct JWKS URL as {issuer}/.well-known/jwks.json - Maintain backward compatibility with CLERK_PUB_JWT_URL env var - Add comprehensive error handling and security validation - Support both explicit URLs and auto-discovery Benefits: - Works seamlessly with different Clerk environments - No need to manage multiple JWKS URLs - Follows JWT/JWKS standards for auto-discovery - More maintainable and flexible 🤖 Generated with [Claude Code](https://claude.ai/code) Co-Authored-By: Claude <[email protected]>

Bumps [@vitejs/plugin-react](https://github.com/vitejs/vite-plugin-react/tree/HEAD/packages/plugin-react) from 5.0.1 to 5.0.2. - [Release notes](https://github.com/vitejs/vite-plugin-react/releases) - [Changelog](https://github.com/vitejs/vite-plugin-react/blob/main/packages/plugin-react/CHANGELOG.md) - [Commits](https://github.com/vitejs/vite-plugin-react/commits/[email protected]/packages/plugin-react) --- updated-dependencies: - dependency-name: "@vitejs/plugin-react" dependency-version: 5.0.2 dependency-type: direct:development update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [@tanstack/react-query](https://github.com/TanStack/query/tree/HEAD/packages/react-query) from 5.85.5 to 5.87.1. - [Release notes](https://github.com/TanStack/query/releases) - [Commits](https://github.com/TanStack/query/commits/v5.87.1/packages/react-query) --- updated-dependencies: - dependency-name: "@tanstack/react-query" dependency-version: 5.87.1 dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [tailwindcss](https://github.com/tailwindlabs/tailwindcss/tree/HEAD/packages/tailwindcss) from 3.4.17 to 4.1.13. - [Release notes](https://github.com/tailwindlabs/tailwindcss/releases) - [Changelog](https://github.com/tailwindlabs/tailwindcss/blob/main/CHANGELOG.md) - [Commits](https://github.com/tailwindlabs/tailwindcss/commits/v4.1.13/packages/tailwindcss) --- updated-dependencies: - dependency-name: tailwindcss dependency-version: 4.1.13 dependency-type: direct:development update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [@cloudflare/workers-types](https://github.com/cloudflare/workerd) from 4.20250826.0 to 4.20250906.0. - [Release notes](https://github.com/cloudflare/workerd/releases) - [Changelog](https://github.com/cloudflare/workerd/blob/main/Dockerfile.release) - [Commits](https://github.com/cloudflare/workerd/commits) --- updated-dependencies: - dependency-name: "@cloudflare/workers-types" dependency-version: 4.20250906.0 dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [jose](https://github.com/panva/jose) from 6.0.13 to 6.1.0. - [Release notes](https://github.com/panva/jose/releases) - [Changelog](https://github.com/panva/jose/blob/main/CHANGELOG.md) - [Commits](panva/jose@v6.0.13...v6.1.0) --- updated-dependencies: - dependency-name: jose dependency-version: 6.1.0 dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [@ipld/dag-cbor](https://github.com/ipld/js-dag-cbor) from 9.2.4 to 9.2.5. - [Release notes](https://github.com/ipld/js-dag-cbor/releases) - [Changelog](https://github.com/ipld/js-dag-cbor/blob/master/CHANGELOG.md) - [Commits](ipld/js-dag-cbor@v9.2.4...v9.2.5) --- updated-dependencies: - dependency-name: "@ipld/dag-cbor" dependency-version: 9.2.5 dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [eslint](https://github.com/eslint/eslint) from 9.34.0 to 9.35.0. - [Release notes](https://github.com/eslint/eslint/releases) - [Changelog](https://github.com/eslint/eslint/blob/main/CHANGELOG.md) - [Commits](eslint/eslint@v9.34.0...v9.35.0) --- updated-dependencies: - dependency-name: eslint dependency-version: 9.35.0 dependency-type: direct:development update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [@hono/node-server](https://github.com/honojs/node-server) from 1.19.0 to 1.19.1. - [Release notes](https://github.com/honojs/node-server/releases) - [Commits](honojs/node-server@v1.19.0...v1.19.1) --- updated-dependencies: - dependency-name: "@hono/node-server" dependency-version: 1.19.1 dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [@types/semver](https://github.com/DefinitelyTyped/DefinitelyTyped/tree/HEAD/types/semver) from 7.7.0 to 7.7.1. - [Release notes](https://github.com/DefinitelyTyped/DefinitelyTyped/releases) - [Commits](https://github.com/DefinitelyTyped/DefinitelyTyped/commits/HEAD/types/semver) --- updated-dependencies: - dependency-name: "@types/semver" dependency-version: 7.7.1 dependency-type: direct:development update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [@clerk/clerk-js](https://github.com/clerk/javascript/tree/HEAD/packages/clerk-js) from 5.90.0 to 5.91.2. - [Release notes](https://github.com/clerk/javascript/releases) - [Changelog](https://github.com/clerk/javascript/blob/main/packages/clerk-js/CHANGELOG.md) - [Commits](https://github.com/clerk/javascript/commits/@clerk/[email protected]/packages/clerk-js) --- updated-dependencies: - dependency-name: "@clerk/clerk-js" dependency-version: 5.91.2 dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [@typescript/native-preview](https://github.com/microsoft/typescript-go) from 7.0.0-dev.20250824.1 to 7.0.0-dev.20250907.1. - [Changelog](https://github.com/microsoft/typescript-go/blob/main/CHANGES.md) - [Commits](https://github.com/microsoft/typescript-go/commits) --- updated-dependencies: - dependency-name: "@typescript/native-preview" dependency-version: 7.0.0-dev.20250907.1 dependency-type: direct:development update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [@adviser/cement](https://github.com/mabels/cement) from 0.4.26 to 0.4.30. - [Commits](mabels/cement@v0.4.26...v0.4.30) --- updated-dependencies: - dependency-name: "@adviser/cement" dependency-version: 0.4.30 dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [vite](https://github.com/vitejs/vite/tree/HEAD/packages/vite) from 7.1.3 to 7.1.4. - [Release notes](https://github.com/vitejs/vite/releases) - [Changelog](https://github.com/vitejs/vite/blob/main/packages/vite/CHANGELOG.md) - [Commits](https://github.com/vitejs/vite/commits/v7.1.4/packages/vite) --- updated-dependencies: - dependency-name: vite dependency-version: 7.1.4 dependency-type: direct:development update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [cborg](https://github.com/rvagg/cborg) from 4.2.14 to 4.2.15. - [Release notes](https://github.com/rvagg/cborg/releases) - [Changelog](https://github.com/rvagg/cborg/blob/master/CHANGELOG.md) - [Commits](rvagg/cborg@v4.2.14...v4.2.15) --- updated-dependencies: - dependency-name: cborg dependency-version: 4.2.15 dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [hono](https://github.com/honojs/hono) from 4.9.4 to 4.9.6. - [Release notes](https://github.com/honojs/hono/releases) - [Commits](honojs/hono@v4.9.4...v4.9.6) --- updated-dependencies: - dependency-name: hono dependency-version: 4.9.6 dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [@clerk/clerk-react](https://github.com/clerk/javascript/tree/HEAD/packages/react) from 5.45.0 to 5.46.1. - [Release notes](https://github.com/clerk/javascript/releases) - [Changelog](https://github.com/clerk/javascript/blob/main/packages/react/CHANGELOG.md) - [Commits](https://github.com/clerk/javascript/commits/@clerk/[email protected]/packages/react) --- updated-dependencies: - dependency-name: "@clerk/clerk-react" dependency-version: 5.46.1 dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [@clerk/backend](https://github.com/clerk/javascript/tree/HEAD/packages/backend) from 2.10.1 to 2.12.1. - [Release notes](https://github.com/clerk/javascript/releases) - [Changelog](https://github.com/clerk/javascript/blob/main/packages/backend/CHANGELOG.md) - [Commits](https://github.com/clerk/javascript/commits/@clerk/[email protected]/packages/backend) --- updated-dependencies: - dependency-name: "@clerk/backend" dependency-version: 2.12.1 dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [@types/node](https://github.com/DefinitelyTyped/DefinitelyTyped/tree/HEAD/types/node) from 24.3.0 to 24.3.1. - [Release notes](https://github.com/DefinitelyTyped/DefinitelyTyped/releases) - [Commits](https://github.com/DefinitelyTyped/DefinitelyTyped/commits/HEAD/types/node) --- updated-dependencies: - dependency-name: "@types/node" dependency-version: 24.3.1 dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [@types/react-dom](https://github.com/DefinitelyTyped/DefinitelyTyped/tree/HEAD/types/react-dom) from 19.1.8 to 19.1.9. - [Release notes](https://github.com/DefinitelyTyped/DefinitelyTyped/releases) - [Commits](https://github.com/DefinitelyTyped/DefinitelyTyped/commits/HEAD/types/react-dom) --- updated-dependencies: - dependency-name: "@types/react-dom" dependency-version: 19.1.9 dependency-type: direct:development update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [@libsql/client](https://github.com/libsql/libsql-client-ts/tree/HEAD/packages/libsql-client) from 0.15.14 to 0.15.15. - [Release notes](https://github.com/libsql/libsql-client-ts/releases) - [Changelog](https://github.com/tursodatabase/libsql-client-ts/blob/main/CHANGELOG.md) - [Commits](https://github.com/libsql/libsql-client-ts/commits/v0.15.15/packages/libsql-client) --- updated-dependencies: - dependency-name: "@libsql/client" dependency-version: 0.15.15 dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [@eslint/js](https://github.com/eslint/eslint/tree/HEAD/packages/js) from 9.34.0 to 9.35.0. - [Release notes](https://github.com/eslint/eslint/releases) - [Changelog](https://github.com/eslint/eslint/blob/main/CHANGELOG.md) - [Commits](https://github.com/eslint/eslint/commits/v9.35.0/packages/js) --- updated-dependencies: - dependency-name: "@eslint/js" dependency-version: 9.35.0 dependency-type: direct:development update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [@typescript/native-preview](https://github.com/microsoft/typescript-go) from 7.0.0-dev.20250907.1 to 7.0.0-dev.20250908.1. - [Changelog](https://github.com/microsoft/typescript-go/blob/main/CHANGES.md) - [Commits](https://github.com/microsoft/typescript-go/commits) --- updated-dependencies: - dependency-name: "@typescript/native-preview" dependency-version: 7.0.0-dev.20250908.1 dependency-type: direct:development update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [wrangler](https://github.com/cloudflare/workers-sdk/tree/HEAD/packages/wrangler) from 4.33.0 to 4.34.0. - [Release notes](https://github.com/cloudflare/workers-sdk/releases) - [Changelog](https://github.com/cloudflare/workers-sdk/blob/main/packages/wrangler/CHANGELOG.md) - [Commits](https://github.com/cloudflare/workers-sdk/commits/[email protected]/packages/wrangler) --- updated-dependencies: - dependency-name: wrangler dependency-version: 4.34.0 dependency-type: direct:development update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [typescript-eslint](https://github.com/typescript-eslint/typescript-eslint/tree/HEAD/packages/typescript-eslint) from 8.41.0 to 8.43.0. - [Release notes](https://github.com/typescript-eslint/typescript-eslint/releases) - [Changelog](https://github.com/typescript-eslint/typescript-eslint/blob/main/packages/typescript-eslint/CHANGELOG.md) - [Commits](https://github.com/typescript-eslint/typescript-eslint/commits/v8.43.0/packages/typescript-eslint) --- updated-dependencies: - dependency-name: typescript-eslint dependency-version: 8.43.0 dependency-type: direct:development update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [@clerk/clerk-js](https://github.com/clerk/javascript/tree/HEAD/packages/clerk-js) from 5.91.2 to 5.93.0. - [Release notes](https://github.com/clerk/javascript/releases) - [Changelog](https://github.com/clerk/javascript/blob/main/packages/clerk-js/CHANGELOG.md) - [Commits](https://github.com/clerk/javascript/commits/@clerk/[email protected]/packages/clerk-js) --- updated-dependencies: - dependency-name: "@clerk/clerk-js" dependency-version: 5.93.0 dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [deno](https://github.com/denoland/deno) from 2.4.4 to 2.5.0. - [Release notes](https://github.com/denoland/deno/releases) - [Changelog](https://github.com/denoland/deno/blob/main/Releases.md) - [Commits](denoland/deno@v2.4.4...v2.5.0) --- updated-dependencies: - dependency-name: deno dependency-version: 2.5.0 dependency-type: direct:development update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <[email protected]>

Bumps [@hono/node-server](https://github.com/honojs/node-server) from 1.19.1 to 1.19.2. - [Release notes](https://github.com/honojs/node-server/releases) - [Commits](honojs/node-server@v1.19.1...v1.19.2) --- updated-dependencies: - dependency-name: "@hono/node-server" dependency-version: 1.19.2 dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <[email protected]>

## Key Improvements 1. **Enhanced LRUMap Usage**: - Use cement's LRUMap with maxEntries (50) for memory management - Add automatic cleanup via onDelete callback to prevent memory leaks - Set up proper object URL revocation when entries are evicted 2. **Fixed Key Generation**: - Use namespaced keys: `cid:${cid}` for DocFileMeta, `file:${metadata}` for File objects - Prevents cache key collisions between different object types - Ensures stable content identity for database-sourced files 3. **Improved Cache Strategy**: - CID-based keys for DocFileMeta objects (truly stable content identity) - File-metadata keys for direct File objects (backwards compatibility) - Proper cleanup ordering to prevent image flickering ## Technical Details - Addresses failing test: "does not cleanup blob URL when DocFileMeta returns new objects" - Uses cement v0.4.35 LRUMap features (maxEntries + onDelete callbacks) - Maintains backwards compatibility for File objects while optimizing for DocFileMeta - Prevents memory leaks through automatic object URL cleanup 🤖 Generated with [Claude Code](https://claude.ai/code) Co-Authored-By: Claude <[email protected]>

- Fixed double cleanup by removing automatic LRUMap onDelete callback - Added stable key tracking to prevent unnecessary cleanup on same CID - Progress: 8/10 tests passing, 2 tests still need fixes - Fixed same-CID tests but broke unmount test - needs refinement Next: Properly handle unmount vs rerender cleanup distinction

- Fixed unmount cleanup by always running useEffect cleanup - Fixed double cleanup issue from LRUMap eviction - 8/10 tests passing: unmount works, cache management works - 2/10 tests failing: same-CID tests expect NO revocation ever The tests require that same content never triggers URL.revokeObjectURL calls, which is stricter than preventing double cleanup. Need final approach to prevent revocation while allowing unmount cleanup.

## Major Improvements ### ✅ Content-Aware Cleanup Logic - File objects: Always cleanup on useEffect change (includes unmount) - DocFileMeta objects: Only cleanup when CID actually changes - Prevents unnecessary URL revocation for same content ### ✅ Enhanced Type Safety - Cleanup functions now store both contentKey and revoke function - Type-safe handling of different cleanup object structures - Proper return types from loadFile function ### ✅ Test Results (9/10 passing) - ✅ Same CID tests: No unnecessary cleanup (0 revoke calls) - ✅ File object tests: Proper cleanup on unmount (1 revoke call) - ✅ Cross-type tests: Correct transitions between File/DocFileMeta - ❌ Different CID test: Still needs nextContentKey tracking fix ### Technical Details - Uses object-type-specific cleanup logic (file: vs cid: prefixes) - LRUMap with maxEntries (50) for memory management - Maintains backwards compatibility for direct File objects - Deferred cleanup timing to prevent image flickering One remaining issue: useEffect cleanup can't access "next" fileData value for different-CID detection. Need layoutEffect or different tracking approach. 🤖 Generated with [Claude Code](https://claude.ai/code) Co-Authored-By: Claude <[email protected]>

…assing ## Final Fix: useLayoutEffect for Proper Ref Timing - Add useLayoutEffect to update nextFileDataRef before useEffect cleanup - Enables detection of different CIDs during cleanup phase - All 10/10 img-file tests now passing ## Complete Implementation Summary ### ✅ Stable CID-Based Content Keys - DocFileMeta objects use `cid:${cid}` keys for stable content identity - File objects use `file:${metadata}` keys for backwards compatibility - Prevents unnecessary cleanup when same content, different object references ### ✅ Content-Aware Cleanup Logic - File objects: Always cleanup on useEffect change (includes unmount) - DocFileMeta objects: Only cleanup when CID actually changes - Zero cleanup calls for same content, proper cleanup for different content ### ✅ Enhanced Cache Management - LRUMap with maxEntries (50) for memory management - Namespaced keys prevent collisions between File/DocFileMeta objects - Updated cement dependency for improved cache controls ### ✅ Test Coverage & Requirements Met - Same CID: 0 URL.revokeObjectURL calls ✅ - Different CID: 1 URL.revokeObjectURL call ✅ - Component unmount: Proper cleanup ✅ - Cross-type transitions: Working correctly ✅ Fully addresses CodeRabbit feedback from PR 1137 discussions r2334960605 and r2334960613. 🤖 Generated with [Claude Code](https://claude.ai/code) Co-Authored-By: Claude <[email protected]>

- Add CRDT head tracking in crdt.ts and crdt-clock.ts - Add network request logging in loader.ts for CAR file loads - Add carLog state logging before validation - Add post-compact carLog logging in test Investigation findings: - Race condition between CAR file writes (async via commit queue) and DbMeta sends - Network requests fail when CAR files not yet written to remote stores - "missing car file" errors cause CAR files to be marked as stale - Validation fails because blocks become inaccessible Attempted fixes (both cause deadlocks): - Promise.all() on commit queue operations - commitQueue.waitIdle() before DbMeta send Next: Need alternative architectural solution for CAR write coordination 🤖 Generated with [Claude Code](https://claude.ai/code) Co-Authored-By: Claude <[email protected]>

…re operations

…tions

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chatgpt-codex-connector · 2025-09-21T02:16:16Z

core/blockstore/loader.ts

          const store = this.attachedStores.activate(at.stores);
          await this.tryToLoadStaleCars(store);
-          const localDbMeta = this.currentMeta; // await store.local().active.meta.load();
+          const localDbMeta = this.XXXcurrentMeta; // await store.local().active.meta.load();
          const remoteDbMeta = store.active.meta.stream();
          await this.waitFirstMeta(remoteDbMeta.getReader(), store, { origin: store.active.meta.url() });


[P1] Use current meta when attaching stores

attach now assigns const localDbMeta = this.XXXcurrentMeta, but the class only defines currentMeta. Because XXXcurrentMeta is undefined, localDbMeta is always undefined and the following ensureAttachedStore call never runs. When attaching a store without WAL, any locally persisted CAR groups are skipped, so the remote store never receives the existing meta and may fall out of sync. The code previously read this.currentMeta, so this looks like a typo introduced in this commit.

Useful? React with 👍 / 👎.

jchris and others added 30 commits September 2, 2025 17:55

feat: add scripts to update tenant ledger limits in D1 databases

88b7409

refactor: simplify JWKS URL priority - use issuer first, then config

c64f73d

style: fix formatting from linter

82fd75a

chore: pnpm-lock.fix

928ad5d

dependabot bot and others added 22 commits September 16, 2025 11:09

chore: dependencies fixes

1c0bb1c

chore: update deno wrangler

1487cbf

chore: update hono and wrangler

e74e2ce

chore: @adviser/cement update

a47a16c

chore: now the stall is gone

1823918

chore: format

efd2aed

style: format code and add consistent string quotes in img-file.ts

7d1d038

wip: meta-corruption in attachable-subscription.test.ts

2729ebe

style: add missing semicolons and format code consistently

1cfd538

feat: add debug logging and assertions for CID validation in blocksto…

e8c5a6d

…re operations

chore: remove debug logging and commented validation checks

1e7d8fa

feat: enable block validation and enhance logging for CRDT sync opera…

b31bacd

…tions

wip: store all changes [skip ci]

86582be

jchris marked this pull request as draft September 21, 2025 02:14

style: format code and improve line wrapping consistency

94a41be

chatgpt-codex-connector bot reviewed Sep 21, 2025

View reviewed changes

refactor: remove unused imports and parameters across core modules

e765720

jchris had a problem deploying to external-pr September 21, 2025 02:18 — with GitHub Actions Failure

style: format imports to use single line in meta-key-hack test

3d8c79b

jchris had a problem deploying to external-pr September 21, 2025 02:19 — with GitHub Actions Failure

jchris closed this Sep 22, 2025

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Update meta-corruption with ImgFile fixes and dependency updates #1164

Update meta-corruption with ImgFile fixes and dependency updates #1164

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Update meta-corruption with ImgFile fixes and dependency updates #1164

Update meta-corruption with ImgFile fixes and dependency updates #1164

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jchris commented Sep 21, 2025

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