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Releases: fmi-basel/gliberal-scMultipleX

v0.8.1

13 Dec 09:22
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What's Changed

Full Changelog: v0.8.0...v0.8.1

v0.8.0

10 Dec 15:19
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What's Changed

Full Changelog: v0.7.9...v0.8.0

0.7.9

24 Aug 08:31
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  • Add Expand Labels Fractal task.
  • Bug fix in Surface Mesh Multiscale Task: if label image of input region is empty, skip region.

0.7.8

23 Aug 16:34
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Updates to Surface Mesh Multiscale task:

  • Select largest component
  • Add optional volume filtering
  • Add z-slice padding during object expansion and erosion
  • Optional masking by parent object for final surface label
  • Add padding prior to anisotropic blurring so that object edges are not clipped
  • Bug fix: Correct erosion factor during label fusion.

0.7.7

23 Aug 09:09
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  • Update Segment by Intensity Threshold Task to improve smoothing with iterative expansion and dilation, and improve rescaling by adding max pixel value.

0.7.6

22 Aug 17:37
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  • Weighted sum of channel images in Segment by Intensity Threshold task.

0.7.5

22 Aug 14:55
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  • Add option to run Otsu threshold for segment by intensity threshold task.

0.7.4

22 Aug 07:17
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  • Add background subtraction and z-illumination correction to Segment by Intensity Threshold task.
  • Update Task defaults.

0.7.3

21 Aug 18:58
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Bug fix in select largest component function for Segment by Intensity Threshold task.

0.7.2

21 Aug 18:24
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  • Add new Fractal task: Segment by Intensity Threshold
  • Run pre-commit clean-up on all files