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1. inga inga Public

   My notes about the implementation of the pipeline used in Nicholls et al 2015. Codes in https://github.com/ckidner/Targeted_enrichment

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2. pezzini_etal_2021_front_biogeo pezzini_etal_2021_front_biogeo Public

   In this repository I included the code used in the paper Pezzini et al. 2020 Phylogeny and biogeography of Ceiba Mill. (Malvaceae, Bombacoideae).

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3. yang-smith2014 yang-smith2014 Public

   My notes on running the Yang & Smith 2014 pipeline.

4. Targeted_enrichment Targeted_enrichment Public

   Forked from ckidner/Targeted_enrichment

   Scripts and outline of pipeline to generate robust consensus sequence from targeted captured reads

   Perl 1

5. Basic_Hyb_Seq_Assembly Basic_Hyb_Seq_Assembly Public

   Forked from ckidner/Basic_Hyb_Seq_Assembly

   A simple Hyb_Seq pipeline for conservatively called consensus sequence

   Jupyter Notebook 1