Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

neuron graphing code #1

Open
wants to merge 2 commits into
base: master
Choose a base branch
from
Open

Conversation

ameenba
Copy link

@ameenba ameenba commented Mar 21, 2019

neuron_tree.py loads all data in swc folder and creates a graph based on ID/parent. Trees for each neuron (or groups of neurons if they connect over a synapse) are then able to be drawn or used to estimate radius based on depth. Other electrical properties can be calculated after radius and fed back into graph or swc file.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant