Merge pull request #4 from abretaud/search_noinstall

Fix startup error when INSTALL_CHADO_SCHEMA == 0
galaxy-genome-annotation · Mar 21, 2017 · 9423bb4 · 9423bb4
2 parents a2fc76a + 63a6110
commit 9423bb4
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diff --git a/Dockerfile b/Dockerfile
@@ -58,4 +58,5 @@ RUN perl Makefile.PL GMOD_ROOT=/usr/share/gmod/  DEFAULTS=1 RECONFIGURE=1 && \
 
 COPY load_schema.sh /docker-entrypoint-initdb.d/00-load_schema.sh
 COPY load_yeast.sh /docker-entrypoint-initdb.d/01-load_yeast.sh
-COPY search.sql /docker-entrypoint-initdb.d/02-search.sql
+COPY search.sh /docker-entrypoint-initdb.d/02-search.sh
+COPY search.sql /search.sql
diff --git a/search.sh b/search.sh
@@ -0,0 +1,5 @@
+#!/bin/bash
+: ${INSTALL_CHADO_SCHEMA:=1}
+if [[ $INSTALL_CHADO_SCHEMA -eq 1 ]]; then
+    psql --username postgres --dbname "$POSTGRES_DB" < /search.sql
+fi