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Issues list

Add best practice to add version to data table for new data managers
#79 opened Sep 30, 2024 by paulzierep
Introduce creator tag in xml_order in top level tool.xml file
#75 opened Jul 24, 2023 by hechth
1
3
Tabs should be permitted, maybe even mandatory.
#73 opened Nov 14, 2022 by hexylena
1
5
Clarify how license tags should be used for tools
#72 opened Oct 10, 2022 by elichad
5
Guidelines for additional output parameters
#66 opened Oct 5, 2021 by bernt-matthias
3
Specifying a tool maintainer in .shed.yml files
#65 opened Jul 20, 2021 by simonbray
3
Documentation of the commands to run to test a tool
#64 opened Apr 14, 2021 by bebatut
Recommend not redirecting stderr
#57 opened Dec 19, 2019 by mvdbeek
1
Recommendations on arbitrary parameter fields (security risks?) discussion
#56 opened Aug 26, 2019 by peterjc
2
Change "Tool on data N" output file naming to something without spaces?
#53 opened Apr 21, 2018 by mblue9
2
When should we write separate scripts and when should we use configfiles
#49 opened Nov 9, 2017 by mvdbeek
2
EDAM ontology topics should be applied to tools
#45 opened Jun 28, 2017 by hexylena
2
indentation in CDATA blocks like command and help discussion
#43 opened Jun 7, 2017 by peterjc
@mvdbeek
5
Formalize container best practice (esp. for complex tools)
#37 opened Feb 27, 2017 by jmchilton
5
Recommendations on bundling related tools in one Tool Shed repository? discussion
#36 opened Feb 14, 2017 by peterjc
4
xsd:boolean does not allow True.
#35 opened Jan 3, 2017 by bgruening
4
Every tool needs a requirement?
#30 opened Jun 30, 2016 by bgruening
6
Force even stronger tool_id naming schema?
#21 opened Oct 28, 2015 by bgruening
Manuscript about Best Practices development
#18 opened Sep 7, 2015 by bgruening
7
Galaxy and datatype management
#13 opened May 31, 2015 by bgruening
7
Password rotation policies discussion
#8 opened Apr 29, 2015 by hexylena
3 tasks
5
ProTip! Exclude everything labeled bug with -label:bug.