3.2.2

• Install/Use repository trees and config file always in/from haplogrep3.jar location

3.2.1

What's Changed

• Add clean-workspace command by @seppinho in #27
• Add task to export variants and annotations by @lukfor in #26

Full Changelog: v3.1.0...v3.2.1

v3.1.0

What's Changed

• Add summary dashboard and introduce different haplogroup levels by @lukfor in #22
• Add command to create haplogroup clusters by @seppinho in #23
• Add population frequencies to clusters by @lukfor in #24
• Add vcf statistics by @lukfor in #25

Full Changelog: v3.0.3...v3.1.0

v3.0.3

What's Changed

• Update to latest haplogrep-core version v3.0.0-rc6

Full Changelog: v3.0.2...v3.0.3

v3.0.2

What's Changed

• Add checkbox to create additional output files by @lukfor in #19
• Support .fa extension for FASTA files by @haansi in #20
• Add haplogroup, missings and global privates to QC report by @haansi in #21
• Update to latest core to fix issues with alignmentrules by @seppinho

Full Changelog: v3.0.0...v3.0.2

3.0.0

Init release of Haplogrep 3 v3.0.0