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Need an ORF from an unannotated genome? This script exploits ncbi's ability to tBLASTn against genome assemblies, to get provisional exon sets from BLAST query-hit alignments.
Quick/dirty script for concatenating CDS predicted by tblastn
requirements:
biopython installed
About
Need an ORF from an unannotated genome? This script exploits ncbi's ability to tBLASTn against genome assemblies, to get provisional exon sets from BLAST query-hit alignments.