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Need an ORF from an unannotated genome? This script exploits ncbi's ability to tBLASTn against genome assemblies, to get provisional exon sets from BLAST query-hit alignments.

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ggavelis/tblastn_exon_stitcher

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tblastn_exon_stitcher

Quick/dirty script for concatenating CDS predicted by tblastn

requirements: biopython installed

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Need an ORF from an unannotated genome? This script exploits ncbi's ability to tBLASTn against genome assemblies, to get provisional exon sets from BLAST query-hit alignments.

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