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| Original file line number | Diff line number | Diff line change |
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| # Class: Analysis | ||
| # Slot: analysis | ||
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| An Analysis is a data transformation that transforms input data to output data. | ||
| The Analysis associated with an entity. | ||
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| URI: [GHGA:Analysis](https://w3id.org/GHGA/Analysis) | ||
| URI: [GHGA:analysis](https://w3id.org/GHGA/analysis) | ||
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| [%200..*>[Analysis],[ProcessDataFile]-%20analysis(i)%200..1>[Analysis],[Analysis]uses%20-.->[IdentifiedByAliasMixin])](https://yuml.me/diagram/nofunky;dir:TB/class/[Submission],[ResearchDataFile],[ProcessDataFile],[IdentifiedByAliasMixin],[AnalysisMethod],[ResearchDataFile]<research_data_files%201..*-%20[Analysis|title:string;description:string%20%3F;type:string%20%3F;ega_accession:string%20%3F;alias:string],[AnalysisMethod]<analysis_method%201..1-%20[Analysis],[ProcessDataFile]-%20analysis%201..1>[Analysis],[Submission]++-%20analyses%201..*>[Analysis],[Submission]-%20analyses(i)%200..*>[Analysis],[ProcessDataFile]-%20analysis(i)%200..1>[Analysis],[Analysis]uses%20-.->[IdentifiedByAliasMixin]) | ||
| ## Domain and Range | ||
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| ## Uses Mixin | ||
| None → <sub>0..1</sub> [Analysis](Analysis.md) | ||
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| * mixin: [IdentifiedByAliasMixin](IdentifiedByAliasMixin.md) | ||
| ## Parents | ||
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| ## Referenced by Class | ||
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| * **[ProcessDataFile](ProcessDataFile.md)** *[ProcessDataFile➞analysis](ProcessDataFile_analysis.md)* <sub>1..1</sub> **[Analysis](Analysis.md)** | ||
| * **[Submission](Submission.md)** *[Submission➞analyses](Submission_analyses.md)* <sub>1..\*</sub> **[Analysis](Analysis.md)** | ||
| * **None** *[analyses](analyses.md)* <sub>0..\*</sub> **[Analysis](Analysis.md)** | ||
| * **None** *[analysis](analysis.md)* <sub>0..1</sub> **[Analysis](Analysis.md)** | ||
| ## Children | ||
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| ## Attributes | ||
| * [ProcessDataFile➞analysis](ProcessDataFile_analysis.md) | ||
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| ### Own | ||
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| * [Analysis➞analysis_method](Analysis_analysis_method.md) <sub>1..1</sub> | ||
| * Description: The alias of the Analysis Method that is associated with this Analysis. | ||
| * Range: [AnalysisMethod](AnalysisMethod.md) | ||
| * [Analysis➞title](Analysis_title.md) <sub>1..1</sub> | ||
| * Description: The title that describes an entity. | ||
| * Range: [String](types/String.md) | ||
| * [Analysis➞description](Analysis_description.md) <sub>0..1</sub> | ||
| * Description: A description summarizing how this Analysis was carried out (e.g., description of computational tools, pipelines, workflows). | ||
| * Range: [String](types/String.md) | ||
| * [Analysis➞type](Analysis_type.md) <sub>0..1</sub> | ||
| * Description: The type of this Analysis. | ||
| * Range: [String](types/String.md) | ||
| * [Analysis➞ega_accession](Analysis_ega_accession.md) <sub>0..1</sub> | ||
| * Description: The EGA accession of the 'Analysis' entity (EGAZ). | ||
| * Range: [String](types/String.md) | ||
| * [Analysis➞research_data_files](Analysis_research_data_files.md) <sub>1..\*</sub> | ||
| * Description: One or more aliases of the Research Data Files that this Analysis used as input to create Process Data Files. | ||
| * Range: [ResearchDataFile](ResearchDataFile.md) | ||
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| ### Mixed in from IdentifiedByAliasMixin: | ||
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| * [IdentifiedByAliasMixin➞alias](IdentifiedByAliasMixin_alias.md) <sub>1..1</sub> | ||
| * Description: The alias for an entity at the time of submission. | ||
| * Range: [String](types/String.md) | ||
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| ## Other properties | ||
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| | | | | | ||
| | --- | --- | --- | | ||
| | **Aliases:** | | data analysis | | ||
| ## Used by | ||
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| Original file line number | Diff line number | Diff line change |
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| # Class: Dataset | ||
| # Slot: dataset | ||
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| A Dataset is a collection of Files that is prepared for distribution and is tied to a Data Access Policy. | ||
| The Dataset associated with an entity. | ||
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| URI: [GHGA:Dataset](https://w3id.org/GHGA/Dataset) | ||
| URI: [GHGA:dataset](https://w3id.org/GHGA/dataset) | ||
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| [%200..1>[Dataset],[Submission]-%20datasets(i)%200..*>[Dataset],[Dataset]uses%20-.->[IdentifiedByAliasMixin],[DataAccessPolicy])](https://yuml.me/diagram/nofunky;dir:TB/class/[Submission],[Study],[IdentifiedByAliasMixin],[File],[Study]<study%201..1-%20[Dataset|title:string;description:string;types:string%20%2B;ega_accession:string%20%3F;alias:string],[DataAccessPolicy]<data_access_policy%201..1-%20[Dataset],[File]-%20dataset%201..1>[Dataset],[Submission]++-%20datasets%201..*>[Dataset],[File]-%20dataset(i)%200..1>[Dataset],[Submission]-%20datasets(i)%200..*>[Dataset],[Dataset]uses%20-.->[IdentifiedByAliasMixin],[DataAccessPolicy]) | ||
| ## Domain and Range | ||
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| ## Uses Mixin | ||
| None → <sub>0..1</sub> [Dataset](Dataset.md) | ||
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| * mixin: [IdentifiedByAliasMixin](IdentifiedByAliasMixin.md) | ||
| ## Parents | ||
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| ## Referenced by Class | ||
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| * **[File](File.md)** *[File➞dataset](File_dataset.md)* <sub>1..1</sub> **[Dataset](Dataset.md)** | ||
| * **[Submission](Submission.md)** *[Submission➞datasets](Submission_datasets.md)* <sub>1..\*</sub> **[Dataset](Dataset.md)** | ||
| * **None** *[dataset](dataset.md)* <sub>0..1</sub> **[Dataset](Dataset.md)** | ||
| * **None** *[datasets](datasets.md)* <sub>0..\*</sub> **[Dataset](Dataset.md)** | ||
| ## Children | ||
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| ## Attributes | ||
| * [File➞dataset](File_dataset.md) | ||
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| ### Own | ||
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| * [Dataset➞title](Dataset_title.md) <sub>1..1</sub> | ||
| * Description: A title for this Dataset. | ||
| * Range: [String](types/String.md) | ||
| * [Dataset➞description](Dataset_description.md) <sub>1..1</sub> | ||
| * Description: A description summarizing this Dataset. | ||
| * Range: [String](types/String.md) | ||
| * [Dataset➞types](Dataset_types.md) <sub>1..\*</sub> | ||
| * Description: The type of this Dataset. | ||
| * Range: [String](types/String.md) | ||
| * [Dataset➞ega_accession](Dataset_ega_accession.md) <sub>0..1</sub> | ||
| * Description: The EGA accession ID of an entity. | ||
| * Range: [String](types/String.md) | ||
| * [Dataset➞data_access_policy](Dataset_data_access_policy.md) <sub>1..1</sub> | ||
| * Description: The Data Access Policy that applies to this Dataset. | ||
| * Range: [DataAccessPolicy](DataAccessPolicy.md) | ||
| * [Dataset➞study](Dataset_study.md) <sub>1..1</sub> | ||
| * Description: The Study associated with this Dataset. | ||
| * Range: [Study](Study.md) | ||
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| ### Mixed in from IdentifiedByAliasMixin: | ||
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| * [IdentifiedByAliasMixin➞alias](IdentifiedByAliasMixin_alias.md) <sub>1..1</sub> | ||
| * Description: The alias for an entity at the time of submission. | ||
| * Range: [String](types/String.md) | ||
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| ## Other properties | ||
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| | | | | | ||
| | --- | --- | --- | | ||
| | **Exact Mappings:** | | SIO:000089 | | ||
| ## Used by | ||
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