Python package

Upgrade and broaden flake8, fixing style problems and bugs #1017

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Run time

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Job	Run time
build (3.7)	3m 2s
build (3.8)	3m 11s
build (3.9)	2m 50s
build (3.10)	3m 45s
build (3.11)	2m 26s
build (3.12)	3m 0s
	18m 14s