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1. open2c/distiller-nf open2c/distiller-nf Public

   A modular Hi-C mapping pipeline

   Groovy 87 25

2. open2c/pairtools open2c/pairtools Public

   Extract 3D contacts (.pairs) from sequencing alignments

   Python 105 32

3. open2c/cooltools open2c/cooltools Public

   The tools for your .cool's

   Jupyter Notebook 142 51

4. open2c/looplib open2c/looplib Public

   A library to analyse the structure of 1d loops and simulate loop extrusion by loop extruding factors.

   Cython 10 6