test adding auto to sources (#104)

* test adding auto to sources * Update sources.yaml * Update citations * Update sources.yaml * Update citations * Update sources.yaml * Update citations
greenelab · Aug 22, 2023 · 7ac11ca · 7ac11ca
1 parent 650aa75
commit 7ac11ca
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Showing 4 changed files with 44 additions and 9 deletions.
diff --git a/...he/98/11/e72adf11474a44d4ac783b4df8eb.val → ...he/4a/ef/ecfcd99dd6bdd5d8cc14599f2912.val b/...he/98/11/e72adf11474a44d4ac783b4df8eb.val → ...he/4a/ef/ecfcd99dd6bdd5d8cc14599f2912.val
diff --git a/_cite/.cache/cache.db b/_cite/.cache/cache.db
diff --git a/_data/citations.yaml b/_data/citations.yaml
@@ -1,5 +1,22 @@
 # DO NOT EDIT, GENERATED AUTOMATICALLY
 
+- id: doi:10.1101/2023.08.21.554169
+  title: Analysis of Pseudomonas aeruginosa transcription in an ex vivo cystic fibrosis
+    sputum model identifies metal restriction as a gene expression stimulus
+  authors:
+  - Samuel L. Neff
+  - Georgia Doing
+  - Taylor Elaine Reiter
+  - Thomas H. Hampton
+  - Casey S. Greene
+  - Deborah A. Hogan
+  publisher: bioRxiv
+  date: '2023-08-21'
+  link: https://doi.org/gsmvkq
+  orcid: 0000-0001-8713-9213
+  member: casey-greene
+  plugin: orcid.py
+  file: orcid.yaml
 - id: doi:10.1101/2023.07.31.551386
   title: 'MousiPLIER: A Mouse Pathway-Level Information Extractor Model'
   authors:
@@ -14,21 +31,23 @@
   link: https://doi.org/gskcvr
   orcid: 0000-0001-8713-9213
   member: casey-greene
-  plugin: orcid.py
-  file: orcid.yaml
+  plugin: sources.py
+  file: sources.yaml
+  image: https://user-images.githubusercontent.com/542643/262141715-23a165d3-0156-4ba0-afc6-0ef260c46d7c.png
 - id: doi:10.1101/2023.07.20.549951
-  title: 'BuDDI: Bulk Deconvolution with Domain Invariance to predict cell-type-specific
-    perturbations from bulk'
+  title: BuDDI:<i>Bulk Deconvolution with Domain Invariance</i>to predict cell-type-specific
+    perturbations from bulk
   authors:
   - Natalie R. Davidson
   - Casey S. Greene
-  publisher: bioRxiv
+  publisher: Cold Spring Harbor Laboratory
   date: '2023-07-22'
   link: https://doi.org/gshs97
   orcid: 0000-0001-8713-9213
   member: casey-greene
-  plugin: orcid.py
-  file: orcid.yaml
+  plugin: sources.py
+  file: sources.yaml
+  image: https://user-images.githubusercontent.com/542643/262144782-78a11c8e-1b10-44e0-85ec-1b709cfd94e4.png
 - id: doi:10.1093/nar/gkad289
   title: 'MyGeneset.info: an interactive and programmatic platform for community-curated
     and user-created collections of genes'
@@ -139,8 +158,9 @@
   link: https://doi.org/gr9twg
   orcid: 0000-0001-8713-9213
   member: casey-greene
-  plugin: orcid.py
-  file: orcid.yaml
+  plugin: sources.py
+  file: sources.yaml
+  image: https://user-images.githubusercontent.com/542643/262425906-9b6e243a-c371-44dd-849c-5a2ce240a99b.png
 - id: doi:10.1186/s13040-023-00332-2
   title: Changing word meanings in biomedical literature reveal pandemics and new
     technologies

diff --git a/_data/sources.yaml b/_data/sources.yaml
@@ -1,3 +1,18 @@
+- id: doi:10.1101/2023.07.31.551386
+  image: https://user-images.githubusercontent.com/542643/262141715-23a165d3-0156-4ba0-afc6-0ef260c46d7c.png
+
+- id: doi:10.1101/2023.07.20.549951
+  image: https://user-images.githubusercontent.com/542643/262144782-78a11c8e-1b10-44e0-85ec-1b709cfd94e4.png
+
+- id: doi:10.1093/nar/gkad289
+  image: https://user-images.githubusercontent.com/542643/262144983-aa829f2e-38fb-4dae-bd0b-80255e5208e6.png
+
+- id: doi:10.1101/2023.06.14.544991
+  image: https://user-images.githubusercontent.com/542643/262145314-a228feb4-024e-47f1-a070-70695e531970.png
+
+- id: doi:10.1038/s41592-023-01886-z
+  image: https://user-images.githubusercontent.com/542643/262425906-9b6e243a-c371-44dd-849c-5a2ce240a99b.png
+
 - id: doi:10.1101/2023.06.26.546586
   image: https://user-images.githubusercontent.com/542643/252371308-1ae174fe-1eb6-47c4-882b-5a3b982bc533.png