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Update code to be compatible with Pydantic2 #359

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This PR updates the code in various places to make it compatible with Pydantic2's stricter type enforcement. Additionally, Pydantic2 generates a more detailed but not meaningfully different schema compared to the schema generated from Pydantic1.

The MIRA_REST_URL for the Github workflows testing configuration has been updated as well to reflect migrated MIRA services. Pydantic>=2.0.0, fastapi>=0.100.0, and httpx are the new dependency updates.

@nanglo123 nanglo123 closed this Sep 10, 2024
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