bump version to 0.2.1

README.md

@@ -23,7 +23,7 @@ After getting the basic *ssssim* implemented in ~8 hours and successfully baseca
 For x86-64 Linux, you can use the precompiled binaries under [releases](https://github.com/hasindu2008/squigulator/releases):
 
 ```
-VERSION=0.2.0
+VERSION=0.2.1
 wget https://github.com/hasindu2008/squigulator/releases/download/v${VERSION}/squigulator-v${VERSION}-x86_64-linux-binaries.tar.gz
 tar xf squigulator-v${VERSION}-x86_64-linux-binaries.tar.gz  && cd squigulator-v${VERSION}
 ./squigulator --help

src/sq.h

@@ -8,7 +8,7 @@
 #include <stdint.h>
 #include "slow5/slow5.h"
 
-#define SQ_VERSION "0.2.0-dirty"
+#define SQ_VERSION "0.2.1"
 
 //model types
 #define MODEL_TYPE_NUCLEOTIDE 1

test/rna_paf.sam.exp

@@ -158,5 +158,5 @@
 @SQ	SN:R1_43_2	LN:2907
 @SQ	SN:R1_73_1	LN:1914
 @SQ	SN:R1_73_2	LN:2865
-@PG	ID:squigulator	PN:squigulator	VN:0.2.0-dirty
+@PG	ID:squigulator	PN:squigulator	VN:0.2.1
 S1_1!R1_92_1!0!1637!+	0	R1_92_1	1	255	1637M	*	0	0	AAGGGGGAAGGGGGACTGGCGCGCGGCAAACCGGGGCGGCGACGAGGCCATTGACGCTCATTTCCTTCCTTTTGCCTCGGCGCCCCACCCAACCCATACACCCCCCCTCAGCGACCGCGGCTTCCGTTCTTGCAAAGGCCTATTCCAGGAGGTACCCATACCACAGCCAGTCCAGCACAACGAAACGGAGAGACCAAAGGGATGAGGAAAAGTGAGATAAATTCAGTCGACGGTTATTGAAAGAGAAAATCGAACGACAGATCCACATGATGGCTAACACTTATCCAACTCAGAAAGTGAGTGTAAAGAGGGCAACGGCGAAGGGTTAGAATGAACAACATGCCAGAAAGATTAAGAATGCGTAGAACTTGAATCGAGCGTATCTAAAGTAGAATACTTCGAAACTAGCGACTTAGGTGTTTGAGTACGCGAGTCTACAATAGAAGCAGCATGCGTTCCTGTTGGTAAGGGAGCTGGATGCTGATTCTGATGACTTTCGACTCCCCGGGTCGAGTTGTTTAAGGGAACTCGAGTACCCAGATAAGGCCAGAATGTTTAACTCTGAAGCTCTCGTCTGCTAAATAGCAATTGCGTCGCACAGTTTCGCAAATAACATATAAATCGACGGCTGGATCTCGTAGCACCAAGGTGCGATATCATCAATGCTAACCTTAATTAGCTAAGAAAGAAGTGCAACAATCTCAGAGCTTTCTTTTTAGACACCCGAACCCGAACGTTTGTTTACCCTCAGCCTCGTGCCAGGCCTGCTCATCAATACTCCTAGATTCAGACAGGAATACAACGGTGGACCGAATATCGGTTAGGCTTGTCTGATTGTTTCTTTAGACCACTAATGGTAAGAGTCCAAAAATATAAAAATAATTTCCTGTTCGGAGTGAAAAGTAAATAGAGAAAGCTATGGAATGAAGAATTGAGTGAAACAGTCGAAACTGAGAAGGAACGGGATGAAGAAGAGTGAGCAATGATGAAGCAACTGGGGACAACGAGGAATGGTTTAGTACATCTGCCCCCTCGTGAAGCCGGGACGTCACAGGAGAAGATGTTCGTGCATAAGAAGGAATATTACAATATAATGGTAGGCGGGCTAGAAGTAATAACAAATTGTGGCTAAACCTCGGGCTAACCGGAACTTCCTACGTAAAAGGAAAAGTGAACAAGGAAAAATTAATGCAAATAAATTACGGACTTGGCGCAGTAAAAAAACAGGATATCAATCCAAAGAAATCGAACCTGTCGATCGACCAGAGGGATTTGTGCCATAAGAAATAGTAGCGAGAAAAAGTACAACGGAGAAAGAGAAAGGCAAACTACCGCAGTGACCGCGAAGCAGACTAAGGCGGGGATTAACTAGCTCTGAAGATCACCATGGGCTATAGCCTCAGAAATCGGGAAACGGGGAAGAAAAGAAGAATTAGCAAGACTACCCCCAGACCAGACCGGTAATTCGGCTTCGTGGCTTTGACCGCGACATCGGTACAGGAAGGCCAGGGGGGGTGATGGGTGGGGGGGAGCGTGCACGAGCGGAAGGAAATATCTTATTAGCCACTAACGGTTGGTTATTGCTATGCCCCTTTCCGAGAAATGTTCGCGAAGTTGAGTAGCTTAGCTGGTCCAGT	*	si:Z:0,70084,1633,0	ss:Z:38,42,43,45,44,43,40,40,44,44,41,45,42,45,45,38,37,41,43,43,49,47,46,37,39,46,40,48,49,45,43,44,41,44,41,43,41,42,42,47,41,41,46,41,42,45,44,46,42,40,45,45,43,38,47,44,43,38,42,44,42,45,35,38,40,40,41,39,43,44,42,41,49,43,47,39,44,41,43,41,41,43,46,40,43,42,43,41,45,43,40,49,41,45,39,43,39,51,41,41,48,43,43,45,47,37,46,41,44,43,45,45,44,47,40,42,47,46,43,42,44,44,40,45,45,46,45,38,49,42,47,45,48,44,47,41,44,38,40,41,44,41,42,43,48,38,38,44,39,43,40,41,42,41,44,47,43,43,43,37,41,42,40,47,43,47,39,43,41,44,41,43,43,42,44,37,41,42,43,43,43,46,45,46,46,41,41,48,41,39,41,42,36,44,41,45,35,45,42,41,46,45,44,46,41,49,43,42,45,41,43,41,42,40,47,40,43,39,42,48,46,42,42,41,44,42,42,46,42,45,45,40,46,46,46,42,44,37,44,43,44,42,37,45,41,44,42,42,43,49,40,46,44,40,42,41,40,39,42,44,45,37,46,41,42,42,52,41,42,39,42,44,42,44,37,44,41,48,42,40,40,43,42,44,43,48,46,46,42,44,43,36,44,41,41,40,44,45,44,44,39,40,48,44,46,45,41,39,40,50,44,39,42,43,49,40,45,42,38,45,44,47,48,44,47,39,44,37,42,44,42,45,44,44,44,44,44,40,48,39,49,43,42,46,38,46,41,43,47,47,44,45,40,41,47,43,47,41,42,44,41,42,43,48,45,38,41,41,37,41,43,42,47,43,47,45,44,43,45,38,45,43,43,44,42,38,45,48,43,35,42,44,48,47,40,42,40,43,46,49,42,40,50,42,44,44,39,37,42,46,41,43,40,44,40,42,38,43,46,43,42,45,42,40,42,45,39,41,47,40,46,46,40,43,45,41,39,45,47,36,41,43,39,43,44,43,49,42,43,41,39,42,44,43,39,40,42,43,40,38,42,46,45,48,41,47,43,44,44,45,43,43,47,39,42,37,46,40,41,42,48,44,44,44,36,39,44,40,44,40,40,44,44,41,43,43,40,39,40,44,44,41,42,46,51,43,42,39,37,45,45,46,41,44,48,45,45,48,43,42,46,46,47,45,43,40,41,40,43,36,37,42,45,41,46,44,37,45,40,44,46,49,45,44,36,42,39,44,45,39,43,44,43,45,48,41,46,41,45,42,40,48,38,44,42,45,49,45,45,37,41,41,44,46,41,40,46,36,44,47,46,37,42,39,40,49,46,42,44,44,45,45,42,44,38,38,41,46,48,41,48,45,41,42,45,38,44,36,48,39,43,43,45,46,45,43,39,39,43,43,42,39,44,38,40,49,42,36,44,49,48,42,45,45,45,48,42,43,41,41,44,43,36,46,38,44,38,44,39,39,42,43,46,41,38,41,46,45,37,46,40,46,43,39,43,42,43,42,44,45,42,47,35,45,40,36,41,44,46,44,41,44,45,41,47,43,46,42,48,53,44,43,45,43,45,37,39,47,44,43,43,40,47,39,41,41,46,45,44,38,43,40,39,44,43,47,40,41,44,41,44,40,40,39,48,43,43,42,43,43,42,45,47,44,48,51,41,56,41,42,41,45,37,39,43,45,46,47,41,47,43,39,38,43,42,40,42,40,41,47,43,45,44,44,40,38,45,41,47,41,43,43,43,43,47,37,42,43,41,43,41,47,40,43,40,41,43,47,40,43,47,41,38,46,44,48,41,37,39,44,41,44,45,45,41,45,45,44,42,46,40,44,49,42,48,50,45,46,45,44,42,43,39,36,45,41,44,42,45,41,42,45,43,45,41,45,43,41,48,40,46,41,41,44,42,45,45,43,38,40,44,45,44,40,42,47,43,43,44,46,42,42,39,40,42,42,43,41,48,42,36,44,43,44,47,43,40,44,44,48,47,44,47,45,36,43,40,41,42,45,43,45,40,43,38,46,38,43,41,50,46,45,43,43,42,44,40,42,42,49,43,40,41,46,43,42,47,41,43,42,35,46,40,47,44,42,48,47,42,40,42,45,44,44,43,45,39,44,46,39,43,39,43,45,38,43,41,44,41,40,47,43,43,48,44,43,36,45,45,44,45,42,43,43,46,38,53,42,39,40,42,45,41,41,42,40,48,43,44,42,45,46,40,46,39,44,47,45,45,44,45,42,47,43,47,42,42,37,41,44,40,44,41,40,46,43,47,47,41,41,39,39,43,42,45,44,43,45,38,36,45,38,42,44,42,46,47,47,42,43,45,41,40,46,45,41,38,46,43,39,43,41,38,42,46,44,41,43,43,50,43,40,39,42,49,47,41,38,45,43,46,48,46,40,49,40,41,45,46,44,44,42,40,44,45,42,41,39,43,44,41,45,40,47,45,40,46,41,36,43,45,46,40,40,48,41,37,44,45,41,42,39,40,43,47,38,41,46,42,43,45,38,42,42,49,43,41,39,46,44,49,36,45,42,56,37,39,46,44,39,41,43,43,43,44,41,44,38,42,44,42,43,37,48,46,41,44,42,41,44,45,43,41,39,44,46,44,38,43,46,45,43,42,44,46,42,45,48,45,37,48,37,39,46,41,45,37,44,44,46,45,37,49,48,42,44,36,46,40,45,52,39,45,47,43,42,40,40,45,43,43,42,45,39,40,44,41,45,44,48,42,39,44,48,46,40,43,42,41,48,43,42,39,44,46,35,40,43,44,38,43,45,39,45,38,42,42,44,48,43,46,38,39,37,40,47,40,42,52,43,47,42,41,47,41,44,41,46,45,42,42,36,43,44,42,38,44,44,46,38,44,40,42,44,40,42,44,38,47,39,42,42,45,40,49,41,43,39,38,44,40,42,43,44,41,46,43,42,38,52,37,47,46,41,46,42,49,39,45,42,37,44,43,42,40,44,44,41,47,44,46,47,46,39,42,47,44,48,43,42,38,42,47,46,49,39,41,48,44,45,42,39,45,47,41,39,44,45,35,39,40,46,43,42,41,45,45,46,43,42,48,46,42,40,39,43,46,40,44,47,47,45,39,45,44,45,45,45,49,38,42,42,44,46,42,47,51,43,41,43,42,43,47,37,48,42,35,40,40,45,39,43,42,43,43,36,45,42,47,42,39,37,43,37,46,46,48,51,42,41,39,39,38,47,38,44,41,40,49,46,45,43,47,40,39,41,48,43,42,43,46,43,44,43,41,46,46,38,41,45,43,45,46,40,52,42,45,46,42,45,46,44,52,43,43,45,40,45,42,43,40,48,41,40,39,43,43,39,39,46,45,50,43,38,45,42,43,39,41,44,41,46,46,46,40,47,45,44,46,41,47,43,37,40,50,43,45,54,44,43,39,39,42,42,42,47,41,42,43,53,37,44,41,48,46,45,45,41,43,40,45,44,48,39,44,39,41,39,41,42,42,44,38,40,41,47,38,41,43,39,41,39,41,42,47,44,40,46,41,42,43,40,44,41,40,46,47,46,46,43,48,43,45,38,41,41,42,43,40,46,42,41,41,43,38,41,36,45,43,45,45,50,40,41,44,41,43,45,43,43,42,46,41,44,42,36,44,39,42,42,43,43,45,44,43,48,44,42,47,48,40,44,48,45,52,38,46,38,46,49,41,40,32,