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FLEET (Functional LD clump EnrichmEnt Test)
Jonathan Hess edited this page Jul 21, 2017
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26 revisions
Take a moment to familiarize yourself with content on the wiki
and readme
.
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Author:
Jonathan L. Hess, Ph.D
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Year:
2017
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Affiliation:
SUNY Upstate Medical University; Department of Psychiatry
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Supervisor:
Drs. Stephen J. Glatt
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PsychGENe Lab website
(www.upstate.edu/psych/research/psychgenelab/)
- Plink v1.9 (https://www.cog-genomics.org/plink2)
- 1000 Genomes reference data (https://www.cog-genomics.org/plink/1.9/resources#1kg)
automatically included with installation of FLEET
- R (https://www.r-project.org)
- bedtools (http://bedtools.readthedocs.io/en/latest/content/installation.html)
- 16GB of RAM
- 10GB of free hard drive space
Feedback is greatly appreciated! Please send suggestions, comments, and questions to: [email protected]
Grackle got no boss