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change binomial link #186

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Merged
gravesti merged 4 commits into from
Dec 19, 2024
Merged

change binomial link #186

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b4186a1
rev
MikeJSeo Dec 18, 2024
e2815ee
Merge branch 'main' into 184-change-to-binomial-link-for-rdrr
gravesti Dec 18, 2024
d8160eb
rev
MikeJSeo Dec 18, 2024
c995b20
more tests
gravesti Dec 19, 2024
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2 changes: 1 addition & 1 deletion R/binary-helper.R
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Expand Up @@ -115,7 +115,7 @@ glm_makeup <- function(binobj, legend = "before matching", weighted = FALSE) {
n <- tapply(binobj$data$USUBJID, binobj$data$ARM, length)
n_event <- tapply(binobj$data$RESPONSE, binobj$data$ARM, sum)
} else {
n <- tapply(binobj$data$weights, binobj$data$ARM, length)
n <- tapply(binobj$data$weights, binobj$data$ARM, sum)
n_event <- tapply(binobj$data$weights * binobj$data$RESPONSE, binobj$data$ARM, sum)
}
data.frame(
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4 changes: 2 additions & 2 deletions R/maic_anchored.R
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Expand Up @@ -485,8 +485,8 @@ maic_anchored_binary <- function(res,
# ~~~ Analysis table
# : set up proper link
glm_link <- switch(eff_measure,
"RD" = poisson(link = "identity"),
"RR" = poisson(link = "log"),
"RD" = binomial(link = "identity"),
"RR" = binomial(link = "log"),
"OR" = binomial(link = "logit")
)
res_template <- list(
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4 changes: 2 additions & 2 deletions R/maic_unanchored.R
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Expand Up @@ -355,8 +355,8 @@ maic_unanchored_binary <- function(res,
# ~~~ Analysis table
# : set up proper link
glm_link <- switch(eff_measure,
"RD" = poisson(link = "identity"),
"RR" = poisson(link = "log"),
"RD" = binomial(link = "identity"),
"RR" = binomial(link = "log"),
"OR" = binomial(link = "logit")
)
transform_estimate <- switch(eff_measure,
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