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Changelog

Changelog for the HuBMAP CCF ASCT+B Reporter

2.7.0 - 2023-06-15

  • HRA Release 5 (v1.4) ASCT+B Tables added
  • OMAP support

2.6.0 - 2022-12-15

  • HRA Release 4 (v1.3) ASCT+B Tables added

2.5.0 - 2022-06-17

  • Added support for selecting CCF Release v1.2 tables (Published June 2022)
  • Too many changes to enumerate here. See comparison

2.4.0 - 2021-08-06

Added in 2.4.0

  • Comparison feature now uses both ID and Name for node comparison
  • AS Count in reports no longer include Body
  • Added ASCT+B API Documentation page
  • Added CSV file upload capability to Playground
  • Refactored routes into new files in ASCTB API

2.3.0 - 2021-07-22

Added in 2.3.0

  • Added export to JSON graph to the ASCT+B API and UI (export menu)
  • Better routes for documentation pages (/docs/1 => /docs/about)
  • Added Select All button to the search dropdown
  • Added Ontology ID and label to the Body node
  • Upgraded dependencies to Angular 12
  • Added linting to the ASCT+B API
  • Migrated from tslint to eslint
  • Bug fixes and code cleanup

2.2.0 - 2021-07-02

Added in 2.2.0

  • Multiple levels of cell types (CT) are now supported in the Table Format and User Interface. Note: The Cell Type hierarchy is currently flattened in the visualization; future work includes visualizing the hierarchical structure.
  • Five biomarker types are now supported in the Table format and User Interface: Genes (BGene), Proteins (BProtein), Lipids (BLipid), Metabolites (BMetabolites) and Proteoforms (BProteoform)
  • CSV URLs can now be used in the organ dropdown, compare, and playground features
  • Clicking on a term label now fetches a description and IRI link for terms across UBERON, FMA, CL, and HGNC ontologies.

2.1.0 - 2021-06-23

Added in 2.1.0

  • Added FMA ontology term support
  • Added more biomarker types (proteins and lipids)
  • Added shapes to biomarkers in the visualization
  • Improved parsing of the ASCT+B data tables
  • Minor UI improvements / bug fixes
  • Counts by organ are shown in the report tab when all organs are selected
  • Added discrepency labels
  • New Demo Video
  • Alert users when they add a Google Sheets Share URL instead of the Browser URL
  • Fixed a regression in the ASCT+B API homepage
  • Duplicate ID's can be highlighed when ID duplicates toggle is on

2.0.0 - 2021-04-06

Added in 2.0.0

  • Redesign of the UI
  • Usability refactoring through user testing
  • Updated architecture with state manager
  • Brand new playground feature
  • Increased interactivity of the graph with into sheets and DOI
  • Filtering biomarkers based on their protein type
  • Improved google analytics
  • Updated legend to show the values of the uploaded compare sheets
  • Revamped report generator
  • Documentation added in the Reporter