License Information

• Apache Commons (cli, lang)

• Apache Lucene

• Apache POI

• Axis

• Dependencies: axis-jaxrpc, axis-saaj, commons-logging, commons-discovery, axis-wsdl4j, activation

• BioJava3
• Charts4J (license: MIT)
• Chemistry Development Kit (CDK)

• XPP3, Jama, Java3d, jgrapht, xom, xml-apis, xerces, xalan, signatures

• Code Generation Library (license: [Apache License, Version 1.0]* (http://www.apache.org/licenses/LICENSE-1.0)) Dependencies: ASM (license: custom)
• CPLEX (licensed: propitory (not distrutbuted)
• Creative Application Framework (CAF)
• Guava (license: Apache License, Version 2.0)

• Dependencies: Findbugs

• JGoodies (Forms and Animation)
• JNI-INCHI

• jnati-core, jnati-deploy

• JSBML
  • BioJava 1.8, KXML, XStream, commons-dbcp, commons-pool, staxmate, stax-api, woodstox, jigsaw
• JUnit (license: Common Public License v1.0) Depdencies: hamcrest
• Log4J (license: Apache License, Version 2.0)
• Mac Widgets
• Model Development Kit (MDK)
• OpenCSV (license: Apache License, Version 2.0)
• Woodstox
  • stax-api, woodstox,