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  1. BBTools BBTools Public

    Python 5 4

  2. kb_uploadmethods kb_uploadmethods Public

    Python 4 21

  3. kb_gtdbtk kb_gtdbtk Public

    GTDB-Tk App

    Python 4 9

  4. kb_djornl kb_djornl Public

    A KBase module wrapper and visualization for RWR tools which use the random walk with restart method on multiplex coexpression networks representing genes (nodes) and distinct lines of evidence (ed…

    Python 4 4

  5. PangenomeOrthomcl PangenomeOrthomcl Public

    Python 3 7

  6. jgi_mg_assembly jgi_mg_assembly Public

    Contains apps for running the JGI metagenome assembly pipeline

    Python 3 4

Repositories

Showing 10 of 229 repositories
  • kb_unicycler Public
    Python 0 MIT 2 0 0 Updated Apr 15, 2025
  • kb_ObjectInfo Public
    Python 0 MIT 1 0 1 Updated Apr 10, 2025
  • kb_djornl Public

    A KBase module wrapper and visualization for RWR tools which use the random walk with restart method on multiplex coexpression networks representing genes (nodes) and distinct lines of evidence (edges) facilitating the rapid determination of the functional context of a set of genes of interest.

    Python 4 MIT 4 0 0 Updated Apr 4, 2025
  • sketch_service Public

    Service that returns similar genomes from a given assembly/genome ID

    Python 0 MIT 3 0 15 Updated Apr 1, 2025
  • KBaseReport Public

    Save plain text, HTML documents, and files as output from a KBase app

    Python 0 MIT 9 1 0 Updated Mar 6, 2025
  • kb_trimmomatic Public
    Python 0 MIT 11 0 0 Updated Jan 30, 2025
  • DataFileUtil Public
    Python 0 MIT 12 10 3 Updated Dec 9, 2024
  • GenomeFileUtil Public
    Python 0 MIT 16 3 2 Updated Nov 1, 2024
  • kb_fasttree Public
    Python 0 MIT 2 0 8 Updated Nov 1, 2024
  • kb_quast Public

    KBase wrapper for the QUAST assembly quality assessment tool.

    Python 0 MIT 7 0 1 Updated Oct 8, 2024
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