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Releases: khanlab/neurobeer

1.2.0

13 Feb 16:26
0c09462
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  • [ENH] Add space flag for designating space to track scalars (tractscalar) in
  • [MAINT] Update description to tractscalar to accurately reflect returned output
    • To be deprecated in a future version
  • [MAINT] Update pybids from v0.6.5 to v0.9.5
  • [MAINT] Update usage of pybids in tractscalar and vtk2nii to reflect updates, turn off bids validation (derivative datasets) such that usage similar to v0.6.5
  • [ENH] Returns only the most similar streamline and corresponding cluster label to reduce memory usage
  • [ENH] Removing outlier indices improved by pre loading fiber count before looping (improves computation time)
  • [MAINT] Remove loading of eigenvector file
  • [ENH] Added additional verbose messages

1.1.0 (Aug 19, 2019)

19 Aug 14:10
0d47b0d
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[ENH] Replace conditional verbose printing with vprint function in misc.py
[MAINT] Clean up comments and removed deprecated code from pre-release version
[MAINT] Update .gitignore
[FIX] Scalar mapping to extracted bundles; was pointing to wrong streamline indices to extract values from
[DOC] Update README.md

1.0.0 (July 24, 2019)

24 Jul 23:11
cd7cb6d
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Initial production release of NeuroBundle Extraction and Evaluation Resource

  • Performs clustering on whole-brain tractography
    • Additionally, assigns cluster label to new data using existing clustered tractography / template
  • Implementation of filter to identify and extract short-assocation, U-shaped fibres (superficial white matter, U-fibres)
  • Enable along-tract analysis of quantitative metrics