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Remove and add some comments
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to print progress when running the script
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DenisSch authored Apr 3, 2020
1 parent bf660ea commit a4e1ec5
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion SingleCellDataExtraction.py
Original file line number Diff line number Diff line change
Expand Up @@ -136,7 +136,7 @@ def MaskZstack(mask_loaded,image,channel_names_loaded):
image_loaded_z = PrepareData(image,z)
#Use the above information to mask z stack
list_of_chan.append(MaskChannel(mask_loaded,image_loaded_z))
#Display memory monitoring --- next 3 lines can be commented
#Print progress
print("Finished "+str(z))
#Convert the channel names list and the list of intensity values to a dictionary and combine with CellIDs and XY
dat = pd.concat([IDs,pd.DataFrame(dict(zip(channel_names_loaded,list_of_chan)))],axis=1)
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